Mannheimia haemolytica USDA-ARS-USMARC-184: B824_11870
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Entry
B824_11870 CDS
T03786
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mhat
Mannheimia haemolytica USDA-ARS-USMARC-184
Brite
KEGG Orthology (KO) [BR:
mhat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhat03016
]
B824_11870
Enzymes [BR:
mhat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
B824_11870
Transfer RNA biogenesis [BR:
mhat03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B824_11870
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AJE07982
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All DBs
Position
complement(1051975..1053951)
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AA seq
658 aa
AA seq
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MFQNNPLLAQLKQQIEASKEYVAGVVKASDKAFGFLECDKKSYFIPPAEMKKVMHGDSVK
AVVKRDGDKEQVEIDSLLEPMLDRFIAQVRLNKEGKLQLAVDHPSIKQTIPANTHKKVTE
KLENGDWVVAQLKTHPLRDDRFFFAQVTQFICKESDNFAPWWVTLARHEQPREPVANEKN
YELHDELAREDLSHLYFTTIDSPSTQDMDDALFIEPIKQNGKRTGWRLVVAIADPTAYIP
ENSHIEKTARQRCFTNYLPGFNIPMLPRELSDDLCSLVPNEKRPALVGFIETDLNGNLIK
ETTFTSAWVESKDRLAYDDVSDYLEGVENAWQPQSEETKQQIEWLHQFTQARIQWRAENA
LLFKEQGDYTFELNEDGSVKDIHVEYRRIANQMIEESMILANICCAKFLSQHAKTGVFNT
HSGFDPKNYELVKSFLLQTLASDENRDELAERYSAERLATLEGYCQMQRDIQDYPEKFLE
LRLRRYLTFAEFKAEVAPHFGLGITDYATWTSPIRKYGDMVNHRLIKQVLLGKQSQAVEE
SVLSRLQEARRQNRLVERDIADWLYARYLAPMVEQAVEFECEIADVSRGGLRAKVIKNGA
QIFVPFSSLHDNKEEMEYRQEELALYIKGEKAYQIGQAVKVKLTEVRLETRSIVGNII
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaacaatccccttttagcccaactcaaacaacaaattgaagcaagcaaagaa
tatgtcgcaggcgttgtcaaagcctcagacaaagcattcggttttttagaatgcgataaa
aaaagctattttattccacctgcggaaatgaaaaaagtaatgcacggtgattcagtgaaa
gccgtagtcaaacgtgatggcgacaaagaacaggtagaaattgattcactacttgagcca
atgctggatagatttattgcccaagttcgcttgaataaagagggcaaattgcaacttgcg
gttgatcacccaagcattaagcaaactatcccggcaaatacccataaaaaagtcactgaa
aaattagaaaatggcgactgggtggttgcacaattaaaaacgcacccattgcgtgacgac
cgttttttctttgctcaagttacccaatttatctgtaaagaatctgataattttgcccct
tggtgggtcacacttgcccgccacgaacagcctcgtgaaccggtcgcaaatgaaaaaaac
tatgaattacacgatgaattagctcgtgaagatttatctcatctttactttaccactatt
gacagcccaagcacgcaagatatggacgatgctctgttcatcgaaccaattaagcaaaat
ggcaagcgaaccggctggcgtttagtggtagcgattgctgacccaaccgcttatatccca
gaaaattcccatattgaaaaaaccgctcgccagcgttgtttcaccaactatttgccgggc
tttaacattccaatgttacctcgagaactctcagacgatctctgttcgcttgtcccgaat
gaaaaacgccctgccctcgttggctttattgaaaccgatttaaacggcaatctcattaaa
gagacaacctttacctctgcttgggtcgaatcaaaagatcgcttggcttacgacgatgtt
tccgattatctcgaaggcgtggaaaatgcgtggcaacctcagtctgaagaaacaaaacaa
caaattgagtggctacatcaatttactcaagcccgcattcaatggcgtgccgagaatgcg
ttgctattcaaagaacaaggcgattatacctttgagttaaatgaagatggctcggtaaaa
gatattcacgttgaatatcgccgtattgcgaatcaaatgatcgaagaatcaatgattctt
gccaatatttgttgtgcaaaattcttaagccaacatgccaaaaccggtgtatttaatacc
cattcaggttttgatccgaaaaattatgaattggtaaaatcatttttactccaaacttta
gccagcgatgaaaatcgtgatgagcttgccgaacgctactccgccgagcgtttagcaacc
ttagaaggctattgccaaatgcaacgtgatattcaagactacccagagaaattcttagag
ttgcgtttacgacgttatttaaccttcgctgaatttaaagccgaagttgccccgcatttc
gggctaggcattaccgattacgccacttggacatcacccatccgtaaatatggcgatatg
gtaaaccaccgtttaatcaagcaagtgttacttggcaaacaaagccaagcggtggaagaa
tcagttttaagccgtttacaagaagctcgccgtcaaaaccgtttagtagaacgtgatatt
gctgactggctttatgctcgttaccttgccccaatggtggaacaagcggtcgaatttgag
tgcgaaattgcagatgtttcccgtggtggcttgcgtgcgaaagtcataaaaaacggtgct
caaatttttgtgccattctccagcttgcacgacaacaaagaggaaatggaataccgccaa
gaagaacttgcactttatattaaaggtgaaaaagcctatcagatcgggcaagcggtgaaa
gtgaaactcaccgaagtacgcttagaaacccgctcaatcgtaggaaatatcatttaa
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