Mannheimia haemolytica USDA-ARS-USMARC-184: B824_16010
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Entry
B824_16010 CDS
T03786
Symbol
cas4
Name
(GenBank) CRISPR-associated protein Cas4
KO
K07464
CRISPR-associated exonuclease Cas4 [EC:
3.1.12.1
]
Organism
mhat
Mannheimia haemolytica USDA-ARS-USMARC-184
Brite
KEGG Orthology (KO) [BR:
mhat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
mhat02048
]
B824_16010 (cas4)
Enzymes [BR:
mhat01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.12 Exodeoxyribonucleases producing 3'-phosphomonoesters
3.1.12.1 5' to 3' exodeoxyribonuclease (nucleoside 3'-phosphate-forming)
B824_16010 (cas4)
Prokaryotic defense system [BR:
mhat02048
]
CRISPR-Cas system
Type I CRISPR-Cas system
Subtype I-A factors
B824_16010 (cas4)
Subtype I-B factors
B824_16010 (cas4)
Subtype I-C factors
B824_16010 (cas4)
Subtype I-D factors
B824_16010 (cas4)
Type II CRISPR-Cas system
Subtype II-B factors
B824_16010 (cas4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas_Cas4
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AJE08396
LinkDB
All DBs
Position
complement(1479459..1480124)
Genome browser
AA seq
221 aa
AA seq
DB search
MDDLQNSTEILPLVQPKFGYDKRSISLSALQHYAFCPRQCALIHNEQVWAENYLTAQGQV
LHERVDSGEPETRKGIRFERTVHVAAEKLGISGILDLVERDLKTGELKPVEYKRGKPKPE
PMDEIQLCAQALCLEEMTGQTINEGALWYMQTRHRLPITFSTELRTKTLATISEVRSLLN
SGTTPLPKYSKRCKACSLIDLCQPQLLDRDRSERYVEEIFK
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggacgatttgcaaaattctacggaaattttaccgcttgttcagccaaaatttggctat
gacaagcggtcgatttcgctttccgctttgcaacactacgccttctgcccacgtcaatgt
gcgttaattcataacgaacaggtgtgggcagaaaactatctcaccgcacaaggtcaagtg
ttgcacgagcgggtagatagtggtgagccagaaacccgaaagggcattcgctttgagcga
acggttcacgttgcagcggaaaaattaggcatcagtggtattttggatttggtcgagcga
gatctgaaaacaggcgaactaaaaccggtggaatataaacgtggcaagccaaaacctgaa
ccgatggacgaaatccaactttgcgcccaagcgttatgtttggaagaaatgacggggcaa
actattaacgagggagcattgtggtatatgcaaacccgccaccgcttgccgatcactttc
tccaccgaactacgcaccaaaaccctcgccaccatttccgaagtgcggtcacttttaaac
agcggaacaacaccactccccaaatatagcaaacgctgcaaagcctgctcactcattgac
ctctgccaaccgcagttgttggatagggataggtcggaaaggtatgtggaagaaatcttt
aaataa
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