Mannheimia haemolytica USDA-ARS-USMARC-184: B824_17840
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Entry
B824_17840 CDS
T03786
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mhat
Mannheimia haemolytica USDA-ARS-USMARC-184
Pathway
mhat03030
DNA replication
mhat03430
Mismatch repair
mhat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B824_17840
03430 Mismatch repair
B824_17840
03440 Homologous recombination
B824_17840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhat03032
]
B824_17840
03400 DNA repair and recombination proteins [BR:
mhat03400
]
B824_17840
Enzymes [BR:
mhat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B824_17840
DNA replication proteins [BR:
mhat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B824_17840
DNA repair and recombination proteins [BR:
mhat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B824_17840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AJE08579
LinkDB
All DBs
Position
complement(1682315..1685791)
Genome browser
AA seq
1158 aa
AA seq
DB search
MSDCRFVHLKVHSDFSMINGLAKVKSLVKTAVANNMVAMGLTDFTNFCGLVKFYGEALGA
GIKPIIGADVYVRTEAGSEDYFELTLLAKNNKGYHNITQILSKAYQQGYIEFPMVEREWL
AELNEGIIILSGGRMGDVGKALLKENRQEAEEKLAFYQQYYPNHFYLSVCRTGRADEERY
IKQAVEFSQKNAIPLVAVNDVVFLKEDDFDAHEIRVAIHDSYTLDDPKRPKKYSPKQYFR
TEEEMCKLFADLPSALANTVEIAKRCSVTVRLGEYFLPNFPTGELSTEDFLVKKSKEGLE
ERLEFLFPDPEERANKRSVYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEHVAET
YGRQAVSQIITFGTMAAKAVIRDVGRVLGHPYSFVDRISKLIPPDPGMTLEKAFAAEPKL
PELYEADEEVKDLIDMARKLEGVTRNAGKHAGGVVIAPTAITDFSPLYCDSEGLHPVTHF
DKNDVEYAGLVKFDFLGLRTLTIIKWALEMINERLAREGKEPIRIETIPLDDKKSFALLL
AAKTTAVFQLESRGMKDLISRLKPDCFEDIIALVALFRPGPLESGMVQNFIDRKHGKEEV
SYPDPQYQHECLKPILEPTYGVIVYQEQVMQIAQELAGYTLGGADLLRRAMGKKKPEEMA
AQREVFEKGAEAKGIDGKLAGQIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAE
FMAAVMTSEMDNTDKIVGFYDECMNMGLTVVPPDVNSGKHRFSVNEKGEIVYGLGAIKGV
GEGPIEAILAARQKEGKFKDLFDLTARVDLKKINRRTFESLIMSGAFDKLGPHRAALMKN
LEDALKASDQHAKMEELGQSDMFGVLTETPEEVQNAYANTPKWSEQVILDGERATLGLYL
SGHPIGRFLKELSHYAPNRLNELQPTFRGQMTTVSGIVMASRVAVTKRGSRIGIATIEDR
SGKLDITLFSEALENFGHLMQQDQIIVATGSVQFDDFSGGLKMSAREVLSLDEARGRFAK
SLALAISKEQLSADFIKKMTAIITPHKEGTLPLHFYYQSPEGRVLLKGGVEWRISPNEAM
FSELKALLGENSVELEFE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattgtcgtttcgttcatttaaaagttcacagtgatttctcaatgattaatggt
ttagctaaggttaaatcgttagtcaaaacggcggttgccaataatatggtggcgatgggc
ttgacggattttactaatttttgcgggttggtgaaattttatggcgaagcattgggagct
ggaattaagccgattatcggggcggatgtttatgtgagaaccgaggcaggcagtgaagat
tattttgaactgacattacttgcaaagaacaataaaggctaccataacattacccaaatt
ttgtctaaggcctatcagcaaggctatattgaatttccgatggtggaacgtgaatggctg
gcagagttgaatgaaggcattatcattctttcgggcgggcgaatgggcgatgtgggtaaa
gccttactcaaagaaaaccgacaagaagctgaagaaaaattggctttttatcagcaatat
tacccgaatcatttttacctttccgtttgccgtaccggacgggcagacgaagaacgctat
atcaaacaagcggtcgaattttcacaaaaaaatgcaattccgttagtggcggtaaatgat
gttgtcttcttgaaagaagatgactttgacgcacacgaaattcgggttgccattcacgac
agctacaccctagacgacccgaaacgcccgaaaaaatactcaccgaaacaatatttccgt
actgaagaggaaatgtgcaagctgtttgccgatttaccgagtgcattggcaaacacggtt
gaaattgcgaaacgctgttcggttaccgtgcgtttgggcgagtatttcctgccaaatttc
ccgaccggtgagctttccaccgaagatttcttggtaaaaaaatcgaaagaaggcttagaa
gagcgtttagagtttctattccctgatcctgaggaaagggcgaacaagcggtcggtttat
gacgaaagattgcaagttgaattagatgtgatcaaccaaatggggttcccgggttacttt
ttgatcgtgatggagtttatccaatggtccaaagataatgatattccggtaggaccgggt
cgtggctcaggggcaggctcattggtggcttatgcgttgaagattaccgatcttgaccca
ttggaatttgatttgctttttgagcgttttctcaaccctgagcgtgtttcaatgcccgat
tttgacgttgatttctgtatggacgggcgagaccgtgtgattgaacacgttgcggaaacc
tacgggcgacaagcggtatcgcaaattatcacattcggtactatggcggcgaaagcggtc
attcgagatgtagggcgagtgcttggacacccctatagctttgtggatcgcatctccaaa
ctcattccgcccgatccaggaatgacgcttgaaaaagcctttgccgctgagccaaaattg
cctgagctatatgaagccgatgaagaggtgaaagaccttattgatatggctcgtaagctc
gaaggtgtaactcgtaatgcaggtaaacacgctggtggtgtggtgatcgccccaactgcg
attaccgatttttcgccgctttattgcgatagcgagggcttacacccggttacccatttt
gataaaaatgacgtggaatatgcaggattggtgaagtttgacttcttaggcttgcgtacg
ctcaccatcatcaaatgggcgttggagatgattaacgaacgtttggctcgtgaaggcaaa
gagccgattcggattgaaaccattccgcttgatgataaaaaatcctttgctctgttgctg
gcagctaaaactacagcagtattccagcttgaatcacggggaatgaaagacttaatttct
cgcctgaagccggactgttttgaagatattatcgcattggtggcactattccgcccaggg
ccgctggaatcaggtatggtgcagaactttattgaccgtaaacacggcaaagaagaggtt
tcttatcctgatccgcaataccaacacgaatgcttaaaacctattctcgagccgacttat
ggggtcattgtttaccaagaacaggttatgcaaattgcacaagagcttgccggttataca
ctcggtggagcggacttactccgccgtgcaatgggtaagaagaaaccggaggaaatggct
gcacagcgtgaagtgtttgaaaaaggggcggaagccaaagggattgacggtaaacttgcc
ggtcaaatttttgacttggtagaaaagtttgctggctacggctttaataaatctcactca
gcagcttatgcgttggtttcttaccaaacactttggctaaaagcccattatccggcagaa
tttatggctgcggtaatgacctcagagatggataataccgataaaattgtcgggttctac
gatgagtgtatgaatatgggcttaaccgttgtgccgcctgatgtaaacagcggtaaacat
cgttttagcgtaaatgaaaaaggcgaaattgtttacgggctaggagcaattaaaggcgtt
ggggaaggaccgattgaggcaattctggcagctcgccaaaaagaggggaaatttaaagat
ctatttgatttaaccgctcgggtcgatctgaaaaaaatcaaccgccgcacctttgaaagc
ctgattatgtccggtgcttttgacaaattaggccctcaccgagctgccttgatgaagaat
ttggaagatgcacttaaagcctcagatcagcacgctaaaatggaggaactcgggcagagc
gatatgtttggcgtgcttaccgagacaccggaagaagtgcaaaatgcttacgccaatacg
ccaaaatggtcggagcaagtgattttagatggagagcgtgccacgctcgggctgtattta
agcggacacccgattggtagattcctcaaagaattatcccactatgcccctaatcggctg
aatgaattgcaaccgactttccgagggcaaatgaccacggtttcaggaattgttatggca
tctcgagtggcagttaccaagcgaggaagccgtattgggattgcgactattgaagatcgc
tcggggaaattggacattacccttttctcggaagccttagaaaatttcgggcatttgatg
caacaagaccaaattattgtggcaacaggttcggtacagtttgatgatttcagcggtgga
ctgaaaatgtcggctcgagaagtgttatcccttgatgaagcaaggggtcgatttgccaaa
agtttagcgttagcgattagcaaagagcaactttctgcagattttattaaaaaaatgacc
gctatcatcaccccacataaagaaggcactttaccgctgcatttttattaccaaagcccg
gaaggtagggtattgctcaaaggcggagtagagtggcgaatcagcccgaatgaggcaatg
tttagcgaattaaaggcacttcttggtgagaattcggttgaactggaatttgaatag
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