Mannheimia haemolytica USDA-ARS-USMARC-184: B824_8280
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Entry
B824_8280 CDS
T03786
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhat
Mannheimia haemolytica USDA-ARS-USMARC-184
Pathway
mhat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B824_8280 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhat03019
]
B824_8280 (recQ)
03400 DNA repair and recombination proteins [BR:
mhat03400
]
B824_8280 (recQ)
Enzymes [BR:
mhat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B824_8280 (recQ)
Messenger RNA biogenesis [BR:
mhat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B824_8280 (recQ)
DNA repair and recombination proteins [BR:
mhat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B824_8280 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HEM4
Helicase_Sgs1
SKI
YKR011C_N
Hanta_Gn-B
Motif
Other DBs
NCBI-ProteinID:
AJE07623
LinkDB
All DBs
Position
complement(709881..711680)
Genome browser
AA seq
599 aa
AA seq
DB search
MNTTAISVLNNIFGYQKFRDGQEEVINAVLENRDCLVIMTTGGGKSLCYQVPALCLDGIT
LVISPLISLMKDQVDQLITNGIEAAYLNSTQTLEEQQLVEQKALSGQLKLLYLSPEKVMT
QGFFHFISLCKISFIAVDEAHCVSQWGHDFRPEYTLLGGLRNTFPNVPLMALTATADLTT
RSDILHHLRLNSPHIYLGSFDRPNIRYTVQEKFKPLEQLIKFISKQQGKSGIVYCNSRKK
VEEITEKLSARKISVMGYHAGMSFEQRERVQNAFQRDDIQIVVATIAFGMGINKSNVRFV
VHFDLPRSIESYYQETGRAGRDDLPSEAVLFYDPSDYAWLQKILLEEPESEQRNIKQHKL
QAIGDFAESQTCRRLVLLNYFGEHRQEQCKNCDICLDPPQQYDGLLDAQKVMSVIYRTGQ
IFGQHHIIAVLRGMNNLKIREHQHDQLSVYGIGKEQSQHYWQNVVRQLIHLGLIIQNIAN
HSALQLTESARPFLRGEKQLQLALPRLGISATAFVQKQASHRYDKDLFARLRFLRKQIAD
LENIPPYIVFNDATLQEMAEFLPTSKVEMLEINGVGERKFERFGQAFMSLIKEYQNNRK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaccgcaatttctgttttaaataatatttttggctatcaaaaattccgagac
gggcaagaagaagttatcaatgccgtgttggaaaatcgtgattgcctcgtgattatgaca
acaggcggtggcaaatctctatgctaccaagtgccggctttgtgcctagacggcatcact
ttggtgatttcgccgcttatttcgttgatgaaagaccaggtggatcaacttatcaccaac
ggcattgaagcagcttatcttaactccactcaaacgctcgaagagcagcaacttgtggaa
caaaaagccttatccggtcaattaaaattactctatctttcccctgaaaaggtaatgact
caaggctttttccactttatttcgctatgtaaaatcagctttattgcggttgatgaagcc
cattgtgtttcccaatgggggcacgatttccgccctgaatataccctgctaggtggctta
cgaaacactttcccgaatgtgccgttgatggcactcaccgccacggcagatctgacaacc
cgctccgatattctgcatcatttacgcttaaatagcccacatatctatttaggcagcttt
gatcgccccaatattcgctacaccgtgcaggaaaaatttaaaccgcttgaacagctcatt
aaattcatcagcaaacagcaaggcaaaagcggtattgtttactgcaacagtcgcaaaaaa
gtggaagaaatcaccgagaaactctcagcccgtaaaatcagcgtgatgggctatcacgcc
ggtatgagttttgaacagagagaacgagtgcagaatgcctttcagcgtgatgatattcaa
attgtggttgccactattgcgtttggtatggggatcaacaaatccaacgtacgttttgtg
gtacatttcgatttacctcgctctatcgaatcttactatcaagaaaccggacgagccggg
cgagatgatctcccttctgaagccgtgcttttttatgatcctagcgattatgcttggtta
caaaaaatattattggaagagccggaaagcgaacagagaaatattaaacagcataaatta
caggcaattggcgatttcgccgaatcacagacttgccgccgtttagtcttactcaactac
tttggggaacatcgccaagagcaatgcaaaaactgcgatatttgtttagatccaccgcaa
caatacgatggcttacttgatgcccaaaaagtgatgtcggtgatttaccgcaccggtcaa
attttcggtcagcaccatattattgcggtattgcgaggaatgaacaatctcaaaattcgt
gaacatcaacacgatcaactttccgtttatggtatcggaaaagaacaaagccaacattat
tggcaaaatgtggtgcggcaactgattcatttagggttgattattcaaaatattgctaac
cattccgctctgcaattaaccgaaagtgccagaccgtttttgcgtggagaaaagcaactt
cagcttgcattgccacgtttaggtatatctgcgactgcatttgtgcaaaaacaagcaagt
catcgctatgacaaagatctattcgcacgcttacgttttttacgcaagcagatagctgac
ctcgaaaatattccaccttatatcgtctttaacgatgccaccttgcaagaaatggcagaa
tttctcccgacttcaaaagtggaaatgttagaaattaatggtgttggtgaacgaaaattt
gaacgatttgggcaagcatttatgagtttaatcaaagaatatcaaaataaccgaaaatag
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