Mannheimia haemolytica USDA-ARS-USMARC-184: B824_8510
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Entry
B824_8510 CDS
T03786
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
mhat
Mannheimia haemolytica USDA-ARS-USMARC-184
Brite
KEGG Orthology (KO) [BR:
mhat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mhat03009
]
B824_8510 (rlmD)
Enzymes [BR:
mhat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
B824_8510 (rlmD)
Ribosome biogenesis [BR:
mhat03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
B824_8510 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
PCMT
RrnaAD
Methyltransf_11
Cons_hypoth95
MTS
TRM5-TYW2_MTfase
Methyltransf_4
Methyltransf_23
Ubie_methyltran
Methyltransf_12
Methyltransf_ANTKMT
FtsJ
Methyltr_RsmB-F
Methyltransf_15
Ribosomal_L22
DOT1
PabTrmU54_TRAM_dom
Motif
Other DBs
NCBI-ProteinID:
AJE07646
LinkDB
All DBs
Position
complement(731864..733183)
Genome browser
AA seq
439 aa
AA seq
DB search
MAIFYSEKSAKKPIKSPACQKATIQSLDYQGLGIAKINGKTWFIENALPDEQVEFKVLEE
KRQYGRGQAVKILKKSANRRMPSCELYGQCGGCQMQHISLELQRKAKQQALFQRLQKLQT
HAIDVQPMIIGNDKHYRRRAKLSIAIQQGKAVIGFRLQNSNQIIPLAHCEVLVEPLANLL
PKLKHLIENWQQPKKLGHIELVSADNTIALFFRHLGALSAQDNHNLRQFATQEQLSLFVM
TSENHIEHLCGERPYYQIQGLKLHFSIRDFIQVNATLNEKMVEKALEWLELSNQDRVLDL
FCGMGNFTLPIAERAKSVVGVEGVEPMVQQARENAVTSGLKNVEFYQTNLDEPFSDKPWA
KEPFNKVLLDPARNGALFCLDHLTSLNPERIVYVSCNPATLVRDAEKLLQLGYRLEKAAM
IDMFPHTGHLESISLFLKS
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggctattttttattctgaaaaatcggcaaaaaaaccgataaaatcacccgcttgtcaa
aaggcaactattcaatcgttagattatcaaggcttagggattgccaaaatcaacggcaaa
acttggtttatcgaaaatgccctgcctgatgagcaggtggaatttaaagtgttggaagag
aaacgccaatacggacgtggacaagcggttaaaattcttaaaaaatctgcaaatcggcga
atgccaagctgcgaactttacgggcaatgcggtggctgccaaatgcagcatatttcgctt
gaactgcaacgtaaggcaaaacaacaggctttattccaacgcttacagaaattgcaaacc
cacgctattgatgttcagccgatgattatcggcaacgataaacactaccgccgtcgggca
aaattaagcattgcgatccagcaaggcaaggcggtaatcggctttcgtttgcaaaattcc
aaccaaattataccgcttgcacactgtgaagtgctagttgaaccgcttgccaatttgctc
ccaaaattaaaacacctgattgaaaactggcaacagccgaaaaaattggggcatattgag
ctggtcagtgcggacaataccattgccctatttttccgccatttaggggcattatcggcg
caagataaccacaatttgcgtcaattcgccacacaagagcaattatctctttttgtgatg
actagcgaaaatcacattgagcatctgtgcggtgaacgcccgtattatcaaattcagggt
ctaaagttgcatttttcaattcgggattttattcaggtgaatgccacgctcaatgaaaaa
atggtggaaaaagcccttgagtggctggaattatccaaccaagatcgagtgttagatctc
ttctgtggaatggggaattttaccttgcctattgctgagcgagcgaaatcggtggtcggt
gtggaaggggtagaaccaatggtgcaacaagcccgagagaatgcggtgacaagcggtcta
aaaaatgtggaattttaccaaaccaatttagatgagccgttttctgacaaaccttgggca
aaagagccgtttaacaaggtactactcgacccggcacgcaacggagcactattttgccta
gatcacttgacatcactcaatcctgagcggattgtttatgtctcttgcaatccggcaaca
ctggtgcgagatgccgaaaaactgttgcaactaggctacaggctagaaaaagcggcaatg
attgatatgttcccccacaccgggcatttggaatctatttcgctgtttttaaaatcttag
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