Microbulbifer harenosus: ACONUD_16965
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Entry
ACONUD_16965 CDS
T11983
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mhau Microbulbifer harenosus
Pathway
mhau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACONUD_16965 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhau03021
]
ACONUD_16965 (rho)
03019 Messenger RNA biogenesis [BR:
mhau03019
]
ACONUD_16965 (rho)
Transcription machinery [BR:
mhau03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACONUD_16965 (rho)
Messenger RNA biogenesis [BR:
mhau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACONUD_16965 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_22
Mor
Spore_III_AA
DUF5010
Motif
Other DBs
NCBI-ProteinID:
XQQ77601
LinkDB
All DBs
Position
3953948..3955207
Genome browser
AA seq
419 aa
AA seq
DB search
MNLSELKTKPIEELIEIAKGMGLENLARSRKQDIIFNILKRHAKSGEDIYGEGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSISGKIRPPKEGERYFALLKVSDIN
FDKPENARNKILFENLTPLFPNERLTLECGNGSSEDLIGRIIDLIAPIGKGQRGLIVAPP
KAGKTIMLQNMAQAITRNNPECHLIVLLIDERPEEVTEMQRSVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTTVPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLSIIATALVDTGSKMDEVIFEEFKGTGNMELQLDRKIAEKRVYPAINV
RRSGTRREELLMPEGELQRVWILRKLLHDMEDLAGTEFLIDKLKDFKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaacctttctgaattaaaaacaaaacccattgaagaactgattgaaattgccaaaggc
atggggttggaaaacctcgcccgttcgcgcaaacaggacatcattttcaatatcctcaag
cgccacgccaaaagcggcgaagacatatacggcgaaggcgtattggaaattcttcaggat
gggtttggtttcctgcggtcagccgattcctcctacctagccggccccgatgatatctat
gtttcccccagccagattcgccgcttcaacctccgcaccggcgactccatttccggcaag
atccgcccccccaaagaaggcgagcgctattttgccctgctgaaagtcagcgatatcaat
ttcgacaagccggaaaacgcccgcaacaagatactgttcgaaaacctcacgccgctgttt
cccaatgaacgcctcaccctcgagtgcggaaatggctcctccgaagaccttatcggccgc
atcatcgacctgatcgcacctatcggcaaaggccagcgcggcctgatcgtggcgccgcct
aaagccggtaaaaccatcatgttgcagaacatggcccaggccatcacccgcaacaacccg
gagtgccacctgatcgttctgctgatcgacgagcgcccggaagaagttaccgagatgcag
cgctccgtgcgcggtgaagtggtcgcgtccaccttcgacgagccgccggcccgccacgta
caggtcgcggaaatggtgatcgagaaggccaaacgccttgtggagcacaagaaagacgta
gtgatcctgctggactccatcacccgtctggcgcgggcctacaacaccaccgtaccgagc
tccggcaaggtattgaccggtggtgtggatgcgcacgcgctggagcgcccgaagcgcttc
tttggtgccgcacggaacatcgaggaaggcggcagtctgtccatcatcgccaccgctctg
gtggataccggttccaaaatggacgaagttatcttcgaggagttcaaaggtaccggtaac
atggagttgcagttggatcgcaagattgccgagaagcgcgtctatccggccatcaacgtc
cgccgctccggtactcgccgtgaagaactgctaatgccggaaggcgagctgcagcgcgtg
tggattctgcgcaagttgctacacgatatggaagatcttgctggcactgaattcctgatt
gataaattgaaggacttcaaaaccaacgacgagttcttcctttccatgaaacggaaataa
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