Micromonospora halotolerans: RMN56_03240
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Entry
RMN56_03240 CDS
T09415
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mhaw
Micromonospora halotolerans
Brite
KEGG Orthology (KO) [BR:
mhaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhaw03016
]
RMN56_03240
Enzymes [BR:
mhaw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RMN56_03240
Transfer RNA biogenesis [BR:
mhaw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RMN56_03240
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WNM40386
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All DBs
Position
710778..712100
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AA seq
440 aa
AA seq
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MTDEPPLRRRAAESRTEEASPHPSSATPEPADAGTEPIAGGPVPLTAPREGTPAPVATPS
ELDEVVARFAAGTGPVALDAERASGYRYSQRAYLVQLRRAGSGTALIDPLPLPDLTPLDG
VIAGAEWVLHAASQDLACLAELGLRPRRLFDTELAARLAGFERVGLAALTEQVLGYSLEK
HHSAADWSSRPLPESWLTYAALDVELLVDLRDALDEELTKQGKSGWAAEEFAALVRNGAR
PPRVRAEPWRRTSGIHRVRGARAQARVRSLWYARDQIAARRDAAPGRVLPDSAIVAAAEL
DPKDEKTLLTLPGFGGRSVRRLARTWLAALDDARQLPDDALPVNPVVEGPPPPHRWAERD
PVAAGRLARCREVVVGTAGAHNLPPENLIAPDFIRRLAWQPPEEITDDTVAETLRTFGAR
EWQITLLLPALTEALHLPTS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgaaccacccctgcgccgtcgggccgccgaaagccgtacggaagaggcgtcg
ccgcatccgtcctcggccacgccggagccggcggacgcggggaccgaacccatcgccggc
gggcccgtcccgctgaccgccccgcgcgagggcacgcccgcgccggtggccactccgagc
gagctcgacgaggtcgtggcccgcttcgcggccggcaccggcccggtggccctggacgcc
gagcgcgcctccggctaccgctacagccagcgcgcctacctggtgcagctgcgccgggcg
ggctccggcacggcgttgatcgacccgctgccgctgcccgacctgacccccctcgacggt
gtgatcgccggggcggagtgggtgctgcacgccgccagtcaggatctcgcctgcctcgcc
gagctgggcctgcgcccgcgccggctgttcgacaccgagctggccgcccggctggccggc
ttcgagcgggtgggtctggccgcgctgaccgagcaggtgctcggctacagcctggagaag
caccactccgcggcggactggtcgagccggccgctgccggagtcctggctgacctacgcg
gcactggacgtggagctgctggtcgacctgcgcgacgcgctcgacgaggagttgaccaag
cagggcaagtcggggtgggctgcggaggagttcgccgcgctggtgcgcaacggcgcccgc
ccgccccgggtgcgcgccgagccgtggcgccgcacctcgggcatccaccgggtgcgtggc
gcgcgggcccaggcccgggtgcgctcgctctggtacgcgcgggaccagatcgccgcacgg
cgggacgccgcaccgggccgggtgctgcccgactcggccatcgtggcggccgcggagctg
gacccgaaggacgagaagaccctgctgacccttcccggtttcggtggccgttcggtgcgc
cggctggcgcgtacctggctggcggccctggacgacgcgcgtcagctgccggacgacgcc
ctgccggtgaacccggtggtggagggtccgccgccgccgcaccggtgggcggagcgggat
ccggtggcggccggccggctggcccgctgccgggaggtggtggtcggcacggccggtgcc
cacaacctgccgccggagaacctgatcgccccggacttcatccgccgcctggcctggcag
ccccccgaggagatcaccgacgacacggtcgcggagaccctgcgcaccttcggcgcccgc
gaatggcagatcaccctcctcctccccgccctgaccgaggccctccacctcccgacctcc
tga
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