KEGG   Micromonospora halotolerans: RMN56_09105
Entry
RMN56_09105       CDS       T09415                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
mhaw  Micromonospora halotolerans
Pathway
mhaw03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mhaw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    RMN56_09105
  09124 Replication and repair
   03420 Nucleotide excision repair
    RMN56_09105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mhaw03021]
    RMN56_09105
   03400 DNA repair and recombination proteins [BR:mhaw03400]
    RMN56_09105
Enzymes [BR:mhaw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RMN56_09105
Transcription machinery [BR:mhaw03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     RMN56_09105
DNA repair and recombination proteins [BR:mhaw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     RMN56_09105
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD
Other DBs
NCBI-ProteinID: WNM41481
UniProt: A0ABZ0A4F3
LinkDB
Position
1941912..1943591
AA seq 559 aa
MSGGPLIVQSDKTLLLEIDHPDAQACRMAIAPFAELERSPEHVHTYRLTPLGLWNARAAG
HDAEAVVDALIKYSRYPVPHALLVDVAETMDRYGRLQLANDPAHGLVLRALDRLVLIEVA
KSKKLAGMLGPKLDDDTIQVHPSERGRLKQALLKLGWPAEDLAGYVDGEAHPIELAEAGK
DGGKPWTLRSYQREAVEAFWAGGSGVVVLPCGAGKTLVGAAAMAEAKATTLILVTNTVAG
RQWKRELIARTSLTEDEIGEYSGERKEIRPVTIATYQVLTSRRGGAFTHLDLFGARDWGL
VVYDEVHLLPAPIFRFTADLQARRRLGLTATLVREDGREGDVFSLIGPKRYDAPWKDIEQ
QGWIAPAECTEVRVTLTDAERMAYATAEAEERYRMAATARTKLPVVRALVDRHPDEQVLV
IGGYIDQLHQLGEYLDAPIVQGSTTNRERERLFDAFRSGEVKTLVISKVGNFSIDLPEAA
VAIQVSGTFGSRQEEAQRLGRVLRPKADGRQAHFYTVVSRDTIDTEYAAHRQRFLAEQGY
AYTIVDADDVLGPKLPTID
NT seq 1680 nt   +upstreamnt  +downstreamnt
gtgagcggtggaccactgatcgtgcagtcggacaagaccctgctgctggagatcgaccac
cccgacgcccaggcgtgccggatggccatcgcgcccttcgccgaactggagcgctccccc
gagcacgtgcacacctaccggctcaccccgctgggcctgtggaacgcccgcgccgccggc
cacgacgccgaggccgtggtggacgcgttgatcaagtactcccgctacccggtgccgcac
gcgctgctggtcgacgtggccgagacgatggaccggtacggccggctccagctcgccaac
gacccggcccacggtctggtgctccgcgcgctggaccggctggtgctcatcgaggtcgcc
aagagcaagaagctcgccggcatgctcggcccgaagctggacgacgacaccatccaggtg
catccctccgagcggggccggctcaagcaggcgctgctcaagctcggctggccggccgag
gacctggccggctacgtggacggcgaggcgcaccccatcgagctggccgaggccggcaag
gacggcggcaagccgtggaccctgcggtcgtaccagcgggaggccgtcgaggcgttctgg
gcgggcggctccggcgtggtcgtgctcccctgcggcgccggcaagaccctcgtcggggcg
gcggccatggccgaggccaaggcgaccacgctcatcctggtcaccaacacggtggccggc
cggcagtggaagcgcgagctgatcgcgcgcacgtcgctcaccgaggacgagatcggcgag
tactcgggcgagcgcaaggagatccgcccggtcaccatcgccacgtaccaggtgctcacc
tcgcggcgcggcggcgcgttcacccacctcgacctgttcggcgcccgcgactggggcctg
gtcgtctacgacgaggtgcacctgctgcccgcgccgatcttccggttcaccgcggacctc
caggcccgccgccggctcggcctcacggcgaccctggtacgcgaggacggccgcgagggt
gacgtgttcagcctgatcggcccgaagcggtacgacgcgccgtggaaggacatcgagcag
cagggctggatcgcccccgccgagtgcaccgaggtacgggtcaccctgaccgacgccgag
cggatggcgtacgcgacggccgaggccgaggagcgctaccggatggcggccaccgcccgg
acgaagctgccggtggtacgcgcgctcgtggaccggcacccggacgagcaggtgctcgtc
atcggcggctacatcgaccaactgcaccagctcggggaatacctggacgcgccgatcgtg
caggggtccacgaccaaccgcgaacgggagcggctcttcgacgccttccggtccggtgag
gtgaagacgctggtcatctccaaggtcgggaacttctccatcgacctgccggaggccgct
gtcgccattcaggtgtccgggaccttcgggtcacggcaggaggaggcgcagcggctgggg
cgggtgctccgaccgaaggcggacgggcggcaggcgcacttctacaccgtggtgtcccgg
gacacgatcgacaccgagtacgcggcgcaccggcagcgtttcctggccgagcaggggtac
gcgtacaccatcgtggacgcggacgacgtactcggcccgaaactgccgacgatcgactga

DBGET integrated database retrieval system