Micromonospora halotolerans: RMN56_09455
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Entry
RMN56_09455 CDS
T09415
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhaw
Micromonospora halotolerans
Brite
KEGG Orthology (KO) [BR:
mhaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhaw03032
]
RMN56_09455 (topA)
03400 DNA repair and recombination proteins [BR:
mhaw03400
]
RMN56_09455 (topA)
Enzymes [BR:
mhaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
RMN56_09455 (topA)
DNA replication proteins [BR:
mhaw03032
]
Prokaryotic type
DNA Topoisomerases
RMN56_09455 (topA)
DNA repair and recombination proteins [BR:
mhaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RMN56_09455 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
MarR_2
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
WNM41542
LinkDB
All DBs
Position
complement(2014679..2017501)
Genome browser
AA seq
940 aa
AA seq
DB search
MPSKAGTTRLVIVESPAKAKTISGYLGPGYVVEASFGHVRDLPRNAAEIPAAYEDKPWAR
LGVDVDNGFAALYVVSADRKKQITKLKSLAKEVDEIFLATDEDREGEAIAWHLVETLKPK
VPVKRMVFHEITKPAIQAAVANPREIDRDLVDAQEARRILDRLYGYEVSPVLWRKVRSGL
SAGRVQSVATRIVVERERQRMAFRTAEYWDILATLAVANPGEGPRTFNATLIALGGDRIA
TGKDFEPTTGRVRAGAGVMHLDESGARGLAARLDGRPFTVTRVEEKPYRRRPYAPFITST
LQQEAARKLRLSSQQTMRTAQRLYENGYITYMRTDSVNLSETAIAAARRQIAELYGERSV
PPEPRRYTGKVKNAQEAHEAIRPAGDNFRTPGEVAKELSAEEFKLYELIWRRTIASQMTD
AVGSSVSVRIRALSSAGEEADFGATGKTITDPGFLRAYVESSDDENAEAEDAERRLPTLT
KDQPLTADELSPQGHHTQPPARYTEASLVKALEELGIGRPSTYASIMQTIQDRGYVFKRG
QAMIPSFLAFAVIGLLERHYPRLIDYDFTASMENELDEIAGGDHAAVDFLTSFYFGSANG
TGDQAIAHAGGLKKLVTENLSDIDARSVNSIPLFTEDDGREVVVRVGRYGPYLQRALPGE
QPTPAAEGEEGGSQGDRAPIPEGLAPDELTPEKVHELFLGGGGERKLGDDPATGEPILLK
SGRFGPYVASGERKSSLLRSQSPDSLTLEQALQLLSLPRVIGTDPEGAEVVANNGRYGPY
VKRGDEFRSLDSEDKMFTVTLDEALALLAAPKTRQRRAAAPPLREMGNDPATEKPLVIKD
GRFGPYVTDGETNASLRRGQTPEALTLEEASEMLAEKRAKGPAPKKKAAKKAAPAKKAAA
KKTAAAKSTTAKKTTTAKATTAKKTPAKKATPKKATTSPE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
gtgccgagcaaagctggaaccacccgtctggtcatcgtcgagtcaccggcgaaggccaag
acgatctcgggctacctcggcccggggtacgtcgtggaggccagcttcggccacgtccgg
gacctgccccgcaacgccgccgagatcccggccgcctacgaggacaagccctgggcccgg
ctcggcgtggacgtggacaacggcttcgccgcgctctacgtggtctccgccgaccggaag
aagcagatcaccaagctgaagtcgctggccaaggaagtcgacgagatcttcctcgccacc
gacgaggaccgcgagggcgaggcgatcgcctggcacctcgtggagacgttgaagcccaag
gtgccggtcaagcggatggtcttccacgagatcaccaagccggccatccaggccgccgtg
gccaacccccgggagatcgaccgggacctggtcgacgcccaggaggcccggcgcatcctc
gaccggctctacggctacgaggtctccccggtgctctggcgcaaggtccgcagcggcctc
tccgccggccgggtgcagtccgtggcgacccgcatcgtggtcgagcgggagcggcagcgg
atggcgttccgcaccgccgagtactgggacatcctggccaccctggcggtcgcgaacccc
ggcgaggggccgcgcaccttcaacgccaccctcatcgcgctgggcggcgaccggatcgcc
accggcaaggatttcgagcccaccacgggccgggtccgggccggcgccggcgtgatgcac
ctggacgagagcggcgcccgggggctggccgcgcggctggacgggcggccgttcacggtc
acccgggtcgaggagaagccctaccgccgccgcccgtacgcgccgttcatcacctccacc
ctccagcaggaggcggcccgcaagctccggctctcgtcgcagcagacgatgcgcaccgcg
cagcggctctacgagaacggctacatcacctacatgcgtaccgactcggtgaacctgtcg
gagaccgccatcgcggcggcccgccggcagatcgccgagctctacggcgagcgcagcgtg
ccgccggagccgcgccgctacaccggcaaggtgaagaacgcgcaggaggcgcacgaggcg
atccgcccggcgggcgacaacttccgcaccccgggcgaggtggccaaggagctgtccgcc
gaggagttcaagctctacgagctgatctggcggcgcaccatcgcctcgcagatgaccgac
gcggtcggctccagcgtctcggtgcgcatccgggcgctctcctccgccggcgaggaggcc
gacttcggcgccaccggcaagaccatcaccgaccccggcttcctgcgcgcctacgtcgag
tccagcgacgacgagaacgccgaggccgaggacgccgagcggcggctgcccaccctgacc
aaggaccagccgctcaccgccgacgaactgtccccccagggtcaccacacccagccgccc
gcccgctacaccgaggcgtcgctggtcaaggccctggaggagctgggcatcggccgcccg
tcgacctacgcgtcgatcatgcagacgatccaggaccgcgggtacgtcttcaagcgcggc
caggccatgatcccgtcgttcctggcgttcgcggtgatcgggctgctggagcggcactac
ccgcgcctcatcgactacgacttcacggccagcatggagaacgagctggacgagatcgcc
ggcggcgaccacgcggccgtcgacttcctcacctccttctacttcggcagcgccaacggc
accggcgaccaggccatcgcccacgcgggcgggctgaagaagctggtcaccgagaacctc
agcgacatcgacgcgcgcagcgtcaactcgatcccgctgttcaccgaggacgacgggcgc
gaggtcgtcgtccgggtcggccgctacgggccgtacctccagcgggcgctgccgggcgag
cagcccacgcccgccgcggagggcgaggagggcggcagccagggcgaccgggcgccgatc
cccgaggggctggcccccgacgagctgaccccggagaaggtgcacgagctgttcctcggc
ggcgggggcgagcgcaagctcggcgacgacccggccaccggcgagccgatcctgctcaag
tccggccgcttcggcccctacgtggccagcggcgagcggaagtcctcgctgctgcgctcg
cagtcgccggacagcctcaccctcgagcaggcgttgcagctgctcagcctgccccgggtg
atcggcaccgaccccgagggcgccgaggtggtggccaacaacggccgctacggcccgtac
gtcaagcgcggtgacgagttccgctcgctggactcggaagacaagatgttcaccgtcacg
ctggacgaggcgctcgccctgctggccgccccgaagacccggcagcgtcgggccgccgcc
ccgccgctgcgggagatgggcaacgacccggcgaccgagaagccgctggtcatcaaggac
ggccggttcggcccgtacgtcacggacggggagaccaacgcctcgctgcggcgcggccag
accccggaggcgctgaccctcgaggaggcctccgagatgctcgccgagaagcgggcgaag
ggtccggcgccgaagaagaaggcggcgaagaaggccgccccggccaagaaggcggcggcg
aagaagaccgccgcggcgaagtccacgaccgccaagaagaccacaacggcgaaggccacc
acagccaagaaaaccccagccaaaaaggcaacaccaaaaaaggcgaccacctcgccggag
taa
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