Micromonospora halotolerans: RMN56_16355
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Entry
RMN56_16355 CDS
T09415
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhaw
Micromonospora halotolerans
Pathway
mhaw03420
Nucleotide excision repair
mhaw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RMN56_16355
03430 Mismatch repair
RMN56_16355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhaw03400
]
RMN56_16355
Enzymes [BR:
mhaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RMN56_16355
DNA repair and recombination proteins [BR:
mhaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RMN56_16355
MMR (mismatch excision repair)
Other MMR factors
RMN56_16355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WNM42816
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All DBs
Position
3431509..3434967
Genome browser
AA seq
1152 aa
AA seq
DB search
MTTQPTLFGTTATPTPRTADAGPRYTPVELAKLLRLPAPTREQAAIIAAPVEPLLVVAGA
GSGKTETMAARVVWLVANSYVRPEQILGLTFTRKAAGELAHRVRTRLDQLIRRLGRQGRD
PHSDPLAGEPTVSTYHSYAGRIVTEHGLRAGYEPTTRLLTEASRWQLVDLLVRNYDGDMS
EVDRMPSTITDAVLALAGELDEHLVDPDELAAWTGRFFAEVQSRPGRVYADVRKALQLQQ
TRLKLLPLVRAYGRRKDDFEAMDFADQLARAARVARDHPGVGVIERDRFRVVLLDEYQDT
SHAQVVLLNALFGGGHPVTAVGDPCQSIYGWRGASAGTLDRFPTEFARTDGAPAEVLSLT
TSWRNRPEILGVANALSVPLRAAGARVPELHAALSVRDPIPHRSPGGRAAGTVHCALLET
YADEADWIADSVLAAWRGAAGMPDALPEHIPAHRRPTTAVLVRLRSQIPALEAALRARGL
PVDVVGLGGLLDTPEVRDVVCTLRVLADPTDGAALLRLLTGARWRIGPRDLVALHRRARA
IARARREVTGDDGPEITVDALDEATLVEALADLGPAQAYSAEGFARLRSYGMELALLRYR
LDQSLPELIADIERTIGLDVEVAVRAGRDGAGDAGLARAHLDALGDVAARFSGETPGATL
AGFLAYLAAAEDEERGLTPGEVEVVEGAVQILTAHAAKGLEWDVVSVAGLTRGVWPGPVR
NSDHWLGGLGVLPFPLRGDADGLPELGLAGAEDQRGVVRAVEDFTDDWRAHDEREERRLA
YVAVTRPRRLLLCSGYWWGEGTKKFRGPSVFLREVHDACLAGGDGHLVDAWAPEPAGDAV
NPTTETVLRAEWPADPLGARRPALAEAAALVRRYLADPEAARREEALLAAGAGAAGNADE
ALPAAGAEPPAEDAEVARWRREADLLLAERAELARRAEAVEVELPGHLSVTQLVALRRDP
EALARTLRRPMPTEPNPYARRGTAFHTWLEQRFGADRLLDVDELPGAADEDAAPDDALTE
LQERFLASEWADRVPVEVEVPFATVIAGVVVRGRMDAVFARPGGRYDVVDWKTGRQPTGR
EADAAAVQLAVYRLAWAELAGVPVERVGAAFHYVRDGVTVRPADLLDASGLTALVAAVPE
FPTEGVPLRRSW
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcagccgacgctgttcggcaccaccgccaccccgacgccccggaccgccgac
gccggcccccgctacaccccggtcgagctggccaaactgctccggctgccggcacccacc
cgggaacaggcggcaatcatcgccgcgccggtggagccgctgctggtggtcgcgggcgcc
ggctcgggcaagacggagacgatggccgcccgggtggtctggctggtcgccaactcctac
gtccgccccgaacagatcctcggcctcaccttcacccgcaaggcggccggcgagctggcg
caccgcgtacgcacccggctcgaccagctcatccgccggctcggccggcagggccgggac
ccgcactccgacccgctggcgggcgagccgaccgtgtccacctaccactcgtacgccggc
cggatcgtcaccgagcacgggctgcgcgccggctacgagccgaccacccggctgctcacc
gaggcgtcccgctggcagctcgtcgacctgctggtccgcaactacgacggcgacatgtcc
gaggtggaccggatgccgtcgaccatcaccgacgccgtgctcgccctggccggggagctg
gacgagcacctggtcgatccggacgagctggccgcctggaccggccggttcttcgccgag
gtgcagtcccgcccggggcgggtctacgccgacgtgcgcaaggccctccagctccagcag
acccggctgaagctgctgccgctggtccgcgcgtacggccggcgcaaggacgacttcgag
gcgatggacttcgccgaccagttggcccgggccgcgcgggtggcccgcgaccaccccggg
gtcggggtgatcgagcgcgaccggttccgggtggtgctgctcgacgagtaccaggacacc
agccacgcccaggtggtgctgctcaacgccctgttcggcgggggccacccggtcaccgcg
gtgggcgacccctgccagtccatctacggctggcgcggggccagcgccggcacgctggac
cggttccccaccgagttcgcccgcaccgacggcgcccccgccgaggtgctcagcctcacc
acgagctggcgcaaccgcccggagatcctcggcgtcgccaacgcgctgtcggtgccgctg
cgggcggccggcgcccgggtgcccgagctgcacgccgcgctcagcgtccgggacccgatc
ccgcaccgcagccccggcgggcgggccgccggcacggtgcactgcgcgctgctggagacg
tacgccgacgaggccgactggatcgccgacagcgtgctggccgcctggcgcggcgcggcc
gggatgccggacgcgctgcccgagcacatcccggcgcaccggcgccccaccaccgccgtg
ctggtccggctgcgcagccagatcccggctctcgaagcggcgctgcgtgcccgcgggctg
cccgtcgacgtggtcggcctgggtgggctgctggacacccccgaggtccgggacgtggtc
tgcacgctgcgggtgctcgccgacccgaccgacggggcggcgctgctgcggctgctcacc
ggcgcgcgctggcggatcgggccgcgcgacctggtcgctctgcaccggcgtgcccgggcc
atcgcgcgggcccgccgggaggtgaccggcgacgacgggccggagatcaccgtggacgcg
ctggacgaggccaccctggtcgaggcgctggccgacctggggccggcgcaggcgtactcg
gcggagggcttcgcgcggctgcggtcgtacgggatggagctggcgctgctgcgctaccgg
ctggaccagtccctgccggagctgatcgcggacatcgagcggaccatcggcctggacgtg
gaggtggcggtccgggccggccgggacggcgccggcgacgccggcctggcccgcgcccac
ctggacgcgctcggcgacgtcgcggcccggttcagcggtgagacgcccggcgccacgctg
gccggtttcctcgcctacctggccgccgccgaggacgaggagcgcggcctcaccccgggc
gaggtcgaggtggtggagggcgcggtgcagatactcaccgcgcacgccgccaagggtctg
gaatgggacgtggtgtcggtggccgggctcacccggggcgtctggcccgggccggtgcgc
aactccgaccactggctgggcgggctcggcgtgctgccgttcccgctgcgcggcgacgcg
gacgggctccccgagctgggccttgccggggcggaggaccagcgcggcgtggtccgggcg
gtggaggacttcaccgacgactggcgggcgcacgacgagcgggaggagcgccggctggcg
tacgtggcggtgacccgcccccgccggctgctgctctgctccggctactggtggggggag
gggacgaagaagttccgcggcccctccgtcttcctccgcgaggtgcacgacgcatgcctg
gccggcggggacggccacctggtcgacgcctgggcgcccgagcccgccggggacgcggtc
aacccgaccacggagacggtcctgcgggcggagtggccggccgacccgctcggcgcccgc
cgtccggcgctggccgaggcggccgccctggtccgccgctacctggccgaccccgaggcg
gcccgccgcgaggaggccctgctggccgcgggcgccggtgccgccgggaacgccgacgag
gcgctaccggccgccggtgccgagccgcccgccgaggacgccgaggtggcccgctggcgg
cgggaggccgacctgctcctcgccgaacgggccgagctggcccggcgggccgaggcggtc
gaggtggagttgcccgggcacctgtcggtgacgcagctggtggcgctgcgccgcgacccg
gaggccctggcccggacgctgcgccggccgatgcccaccgagcccaacccgtacgcccgg
cggggcaccgccttccacacctggctggagcagcgcttcggcgccgaccggctgctcgac
gtggacgagctgcccggcgcggccgacgaggacgccgccccggacgacgcgctcaccgag
ctccaggagcgcttcctggccagcgagtgggccgaccgggtgccggtggaggtggaagtg
cccttcgccacggtgatcgccggcgtggtggtccggggccggatggacgccgtcttcgcg
cgccccggcggccgctacgacgtggtcgactggaagaccggccggcagcccaccgggcgg
gaggccgacgccgcggccgtgcagctcgccgtctaccggctggcctgggccgagctggcc
ggggtgccggtcgagcgggtcggggccgccttccactacgtccgggacggcgtgaccgtt
cgcccggccgacctgctggacgcctccgggctgaccgcgctcgtcgccgccgtgccggaa
tttccgacagagggtgtgccgttgcggagatcgtggtag
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