Micromonospora halotolerans: RMN56_16430
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Entry
RMN56_16430 CDS
T09415
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhaw
Micromonospora halotolerans
Pathway
mhaw03420
Nucleotide excision repair
mhaw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RMN56_16430
03430 Mismatch repair
RMN56_16430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhaw03400
]
RMN56_16430
Enzymes [BR:
mhaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RMN56_16430
DNA repair and recombination proteins [BR:
mhaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RMN56_16430
MMR (mismatch excision repair)
Other MMR factors
RMN56_16430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Complex1_LYR_1
Motif
Other DBs
NCBI-ProteinID:
WNM42830
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All DBs
Position
3448653..3450812
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AA seq
719 aa
AA seq
DB search
MVVHSAAERVLAGLDPEQRSAVTAPAGPVCILAGAGTGKTRAVTSRIAHRALTGDIAARH
VLAVTFTARAAAEMRARLTGLGVGGVQARTFHAAALRQVRYFAPRLLEGRAMPELLDSKV
RVVTLAAAKVGLRTDRAAARDLAGEIEWAKSSLVEPGEYVVAAAKALRETPHEPAKVAEV
FAAYERLKRGNGVIDFEDMLRAAVWGIEEHADVAEQVRGQYRHFVVDEYQDVNPLQQRLL
DAWLGGRDDLTVVGDASQTIYSFTGATSSYLIDFPRRHRNATVVRLVRDYRSTPQVVGLA
NAVISQARGAEARLRLELQGQRPPGPEPELRIFTDEPAEANAVAARCRALVDGGTPAREI
AVLFRTNAQSEAYEKALTEAAVPYVVQGAERFFERPEVRQAMIALRAATRSIPGETPLPT
AVVEGLAAVGWAPDAPPPGGAARERWEALAALVQLAEEYAATPEVVPIGEAAAIERPVTL
GDFNEELARRAAQQHVPTVEGVTLASLHSAKGLEWDAVFLVGLAEGTLPTTYAKTPEQVE
EERRLLYVGITRAREWLWLSYAAARSPGGRARRPSRFLPQLDRSGGGERAGAGTGAARRT
ERRRAQVVSCRICGATLLAGADRKLGRCPTCPSDLDEELYERLREWRQRVAGAQKVPAYV
VFTDATLTALAERKPGRTEELIAIAGIGPRKLGLYGETVLALVAGAEVDEVCPQKSFEI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtggtggttcactcagcggcggaacgggtgctcgccggcctcgacccggagcagcggtcc
gcggtgaccgccccggccggcccggtctgcatcctggccggcgccgggaccggcaagacc
cgggcggtgacctcccggatcgcgcaccgggcgctcaccggcgacatcgccgcccggcac
gtgctggccgtcacgttcaccgcccgcgccgccgccgagatgcgggcccggctcaccggg
ctgggcgtcggcggcgtccaggcccgcacgttccacgcggcggcgctgcgccaggtccgc
tacttcgcgccccggctgctggagggccgggccatgcccgagttgctcgacagcaaggtc
cgggtggtcaccctggccgccgccaaggtgggcctgcggaccgaccgggccgccgcccgg
gacctggccggggagatcgagtgggccaagtcgtcgctggtcgagccgggtgagtacgtg
gtggccgcggccaaggcgctgcgcgagaccccgcatgagccggcgaaggtggccgaggtc
ttcgccgcgtacgagcggctcaagcgcggcaacggggtgatcgacttcgaggacatgctg
cgcgccgcggtctgggggatcgaggagcacgccgacgtcgccgagcaggtccgtggccag
taccggcacttcgtggtcgacgagtaccaggacgtcaacccgctccagcagcggctgctg
gacgcctggctcggcggccgggacgacctcaccgtcgtcggcgacgccagccagaccatc
tactcgttcaccggggcgacctcgtcctacctgatcgacttcccgcgccggcaccgcaac
gccaccgtggtccggctcgtccgcgactaccgctccaccccgcaggtggtcgggctggcc
aacgcggtgatctcccaggcccggggcgcggaggcccggctccggctggagctgcagggc
cagcgcccgcccggccccgaacccgagttgcgcatcttcaccgacgagccggccgaggcc
aacgcggtcgcggcccgctgccgggcgctggtcgacggcggcaccccggcccgggagatc
gcggtgctgttccgcaccaacgcccagtccgaggcgtacgagaaggcgctcaccgaggcc
gcggtgccgtacgtcgtgcagggagcggagcgcttcttcgagcgccccgaggtgcgccag
gccatgatcgcgctgcgcgccgccacccggtcgatcccgggggagaccccgctgccgacc
gccgtcgtggaggggctcgccgcggtcggctgggcgcccgacgcgcccccgcccggcggg
gccgcgcgcgaacggtgggaggcgctcgccgcgctggtccagctcgccgaggagtacgcg
gcgacgcccgaggtggtgccgatcggcgaggccgccgcgatcgagcgcccggtcaccctg
ggcgacttcaacgaggaactggcccggcgggccgcccagcagcacgtgcccaccgtggag
ggcgtgacgctcgcctcactgcactcggccaagggtctggagtgggacgccgtcttcctg
gtcgggctggccgagggcaccctgcccaccacgtacgcgaagacccccgagcaggtcgag
gaggagcggcggctgctgtacgtcgggatcacccgggcgcgcgagtggctctggctgtcg
tacgcggcggcccgctcgcccggcggccgggcccggcggccgtcccggttcctgccccag
ctggaccgctccggcggcggcgagcgggccggcgcgggcacaggcgcggcccggcgcacc
gagcggcggcgcgcccaggtggtctcctgccggatctgcggcgccaccctgctcgccggg
gcggaccggaagctgggccgctgcccgacgtgtccgtccgatctggacgaggagctgtac
gagcggctgcgcgagtggcggcagcgggtcgccggggcgcagaaggtgccggcgtacgtg
gtcttcaccgacgccacgctcaccgcgctggccgagcggaagccgggccgcaccgaggag
ctgatcgcgatcgccgggatcggcccccgcaaactgggactttacggcgaaacggtgctg
gccctggtggccggtgcggaggtggacgaggtctgcccgcagaaaagtttcgaaatctag
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