Micromonospora halotolerans: RMN56_20330
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Entry
RMN56_20330 CDS
T09415
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mhaw
Micromonospora halotolerans
Pathway
mhaw03030
DNA replication
mhaw03430
Mismatch repair
mhaw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhaw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RMN56_20330
03430 Mismatch repair
RMN56_20330
03440 Homologous recombination
RMN56_20330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhaw03032
]
RMN56_20330
03400 DNA repair and recombination proteins [BR:
mhaw03400
]
RMN56_20330
Enzymes [BR:
mhaw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RMN56_20330
DNA replication proteins [BR:
mhaw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RMN56_20330
DNA repair and recombination proteins [BR:
mhaw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RMN56_20330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
UVR
Motif
Other DBs
NCBI-ProteinID:
WNM37511
LinkDB
All DBs
Position
complement(4259237..4260994)
Genome browser
AA seq
585 aa
AA seq
DB search
MTRPDYVQEALAGLDRVAGTGVDPALPLYATTFVVVDLETTGGAPDGGGITEIGAVKVRG
GEELGVLATLVNPGVPIPPFITVLTGITQAMLLPAPPIEQVLPSFLEFVADAVLVAHNAP
YDVGFLKAACAKHGYRWPNPRVLDTAALARRVLTRDEVPNRKLGTLAAYFRTATQPTHRA
LDDAKATVDVLHGLIGRLGGHRVDTVGEAIEFARAVTPTQRRKRHLAEGLPKVPGVYIFR
AADDRPLYVGTSGDIATRVRSYFTASEKRARISEMLAAAERVEAVECAHSLEAEVRELRL
IAAHAPPYNRRSKYPERQVWLKLTDEAYPRLSIVRDLAPTDSAYLGPFRSKQAAELAAAG
FHDAVPLRQCTHRLSRRTTMPACALAELGRCPAPCEHRITPEEYDHRAAVPFRTATRDDP
QVVVDALLARIEVLSAAQRYEEAAVVRSRLAAVLRAAVRMQRLAALTGIAELAAARPAAG
GGWELALVRHGRLAGAGVSPPGVHPRPTITAIRATAETVLPGHGPVPAATAEETERILSW
LERPETRLVETSAGWASPVAGAGRFRDLLTKAENGASHQLSTERS
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcgaccggactacgtccaggaggccctggccggcctggaccgggtggcgggcacg
ggggtcgaccccgcgctgccgctctacgcgaccaccttcgtggtggtcgacctggagacc
accggcggcgcgccggacggcggcgggatcaccgagatcggcgccgtcaaggtgcgcggc
ggcgaggagctgggcgtgctggccaccctggtcaacccgggggtgccgatcccgccgttc
atcaccgtgctgaccgggatcacccaggccatgctgctgcccgcgccgcccatcgagcag
gtcctgccgagcttcctggaattcgtcgccgacgccgtcctggtcgcccacaacgccccc
tacgacgtgggcttcctcaaggccgcctgcgcgaagcacggctaccgctggcccaacccg
cgggtgctcgacaccgccgcgctggcccgccgggtgctcacccgcgacgaggtgcccaac
cgcaagctgggcaccctggcggcctacttccgcaccgccacccagcccacccaccgggcg
ctcgacgacgccaaggccacggtcgacgtgctgcacgggctgatcggccggctcggcggg
caccgggtggacaccgtcggcgaggccatcgagttcgcccgggcggtcaccccgacccag
cgccggaagcggcacctcgccgaggggctgccgaaggtgcccggcgtctacatcttccgg
gccgccgacgaccgtccgctctacgtcggcacctccggcgacatcgccacccgggtgcgc
agctacttcacggcctccgagaagcgggcccggatctcggagatgctggccgccgccgag
cgggtcgaggcggtcgagtgcgcccactcgctggaggccgaggtgcgcgagctgcggctg
atcgccgcgcacgccccgccctacaaccggcggtcgaagtacccggagcgccaggtctgg
ctgaagctgaccgacgaggcgtacccgcggttgtcgatcgtgcgcgacctggcccccacc
gactcggcctacctcggcccgttccgctcgaagcaggcggccgagctggccgccgccggc
ttccacgacgcggtgccgctgcgccagtgcacccaccggctgtcccggcgcaccaccatg
ccggcctgcgcgctggccgagctgggtcgctgcccggcgccctgcgagcaccggatcacc
ccggaggagtacgaccaccgcgccgccgtgccgttccgcaccgccacccgggacgacccg
caggtggtggtggacgccctgctggcccggatcgaggtgctctccgccgcccagcgctac
gaggaggccgcggtggtgcgcagccggctcgccgcggtgctgcgcgcggcggtccggatg
cagcgcctggccgcgctgaccggcatcgccgagctggccgccgcccgcccggccgccggg
ggcggctgggagctggccctggtgcgccacggccggctggccggggccggggtgtccccg
ccgggtgtccacccgcgaccgaccatcaccgcgatccgggccacggccgagacggtcctg
cccgggcacggcccggtgccggcggccaccgcggaggagaccgagcgcatcctgtcctgg
ttggagcgaccggagacccggctggtcgagacgtcggccggatgggcgtcgccggtcgcc
ggcgcgggccggttccgcgacctgctgaccaaggcggagaacggcgcgtcccaccaactc
tcgaccgaacgctcatga
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