Micromonospora halotolerans: RMN56_21625
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Entry
RMN56_21625 CDS
T09415
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhaw
Micromonospora halotolerans
Pathway
mhaw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhaw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RMN56_21625 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhaw03019
]
RMN56_21625 (recQ)
03400 DNA repair and recombination proteins [BR:
mhaw03400
]
RMN56_21625 (recQ)
Enzymes [BR:
mhaw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RMN56_21625 (recQ)
Messenger RNA biogenesis [BR:
mhaw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RMN56_21625 (recQ)
DNA repair and recombination proteins [BR:
mhaw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RMN56_21625 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
WNM37743
LinkDB
All DBs
Position
complement(4572621..4574462)
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AA seq
613 aa
AA seq
DB search
MVSPTDQRTDDALRVLRRVFGYDAFRGFQHEVVEHVVAGGDALVLMPTGGGKSLCYQIPA
LVRDGVAVVVSPLIALMQDQVDALTAVGVRAGFLNSTQDLAERRRVEAAFLAGELDLLYL
APEALATRATLALLERGRIGLFAIDEAHCVSQWGHDFRPDYLNLSMLHERWPGVPRIALT
ATATQATRAEIATRLKLTDARHFVASFDRPNIQYRIVPKREPRKQLLALLRDEHPGDAGI
VYCLSRASVEKTAEFLVANGIAALPYHAGLDAATRAANQQRFLREDGLVMVATIAFGMGI
DKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIETSEGDLA
HRRNLAAHLDAMLALCETVRCRRAQLLEYFGEGGTPNCGNCDTCLEPPESWDGTVAAQKL
LSTVYRLDRERNQRFGAGHCVDILLGKRTDKIDQHGHDSLSTFGIGTDLREAEWRGVVRQ
LLAEGLLAVEGDYGTLALTEASAEVLGRRRTVTMRREPERPASGRSGKPRGAATVVADLA
PAAVPVFERLRAWRAATAKEQGVPAYVIFHDATLRQIATEAPTSLAELSRISGVGDNKLA
KYGEGILGVLAES
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtctcccccaccgatcagcggaccgacgacgcgctgcgggtgctgcgccgggtgttc
ggctacgacgccttccgcggcttccagcacgaggtcgtcgagcacgtggtggccggcggt
gacgcgctggtgctcatgccgaccgggggcggcaagtcgctctgctaccagatcccggcg
ctggtccgcgacggcgtggcggtggtcgtctcgccgctgatcgcgctcatgcaggaccag
gtcgacgcgctgaccgcggtcggcgtccgggccgggttcctcaactcgacccaggatctc
gccgagcggcggcgggtcgaggcggcgttcctcgccggcgagctcgacctgctctacctc
gcccccgaggcgctggcgacgcgcgccacgctcgccctgctggagcgcgggcggatcggg
ctgttcgcgatcgacgaggcgcactgcgtctcccagtgggggcacgacttccgccccgac
tacctcaacctgtcgatgctgcacgagcgctggccgggggtgccgcggatcgcgctgacc
gccaccgccacccaggccacccgggcggagatcgccacccggctcaagctcaccgacgcc
cggcacttcgtggccagcttcgaccggcccaacatccagtaccggatcgtgcccaagcgg
gagccgcgcaagcagctgctcgccctcctgcgcgacgagcacccgggcgacgccggcatc
gtctactgcctgtcccgcgcctccgtggagaagaccgcggagttcctcgtcgccaacggg
atcgcggcgctgccataccacgccgggctcgacgcggcgacccgggcggccaaccagcag
cggttcctgcgcgaggacggcctcgtcatggtcgccaccatcgccttcggcatgggcatc
gacaagcccgacgtccgcttcgtcgcccacctcgacctgcccaagtcggtggagggctac
taccaggagaccggccgcgccgggcgcgacgggctgccgtcgacggcctggctggcgtac
gggctccaggacgtggtgcagcaacgcaagatgatcgagacctcggagggcgacctggcc
caccggcgcaacctcgccgcccacctcgacgccatgctggcgctctgcgagacggtgcgc
tgccgccgcgcgcaactcctcgaatacttcggcgagggcggcacacccaactgcggcaac
tgcgacacctgcctggagccgccggagtcctgggacggcacggtcgccgcgcagaagctg
ctctccaccgtctaccggctcgaccgcgaacgcaaccagcggttcggcgccggccactgc
gtggacatcctgctcggcaagcgcaccgacaagatcgaccagcacggccacgactcgctg
agcaccttcggcatcggcaccgacctgcgcgaggccgagtggcggggcgtggtgcggcag
ctgctggccgagggcctgctcgccgtcgagggcgactacggcacgctggccctcaccgag
gcgagcgccgaggtgctgggccgccggcggaccgtcaccatgcggcgcgagccggaacgg
cccgcgtccggccggtccggcaagccccggggtgcggccaccgtggtggccgacctcgcc
ccggccgccgttccggtgttcgagcggctccgcgcctggcgggcggccaccgccaaggaa
cagggcgtcccggcgtacgtgatcttccacgacgccaccctgcggcagatcgccaccgag
gcgcccacctcgctggccgagctgtcccggatcagcggcgtcggcgacaacaagctggcc
aagtacggcgaggggatcctcggcgtgctcgccgagtcctga
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