Micromonospora halotolerans: RMN56_21980
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Entry
RMN56_21980 CDS
T09415
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
mhaw
Micromonospora halotolerans
Brite
KEGG Orthology (KO) [BR:
mhaw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhaw03021
]
RMN56_21980
Transcription machinery [BR:
mhaw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RMN56_21980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
HTH_24
HTH_23
GerE
MarR
HTH_37
DUF7343
MarR_2
HTH_3
YnhH-like
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
WNM37806
LinkDB
All DBs
Position
complement(4640713..4641513)
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AA seq
266 aa
AA seq
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MVTPIATATAVLSPPPHHAATGHSEQLLRRRASLTADDPDRARLRARIIEANLPLAGRLA
RRYTGRGEPYEDLAQVGALALIRAVDGYDTERGTPFASYAIPTILGAMRRHFRDTAWAIR
VPRAAQELTYRVPAARSEFGQRRGRLPTDGELAGHLKVTVAELLAALAASEVYRLPSLNE
LQPGSNAVERIALIGAVDPGYAAVDDHMTLRLVLAALSARERQILAMRFHGDLTQAEIAG
RVGLSQMHVSRLLKRSLAQLRAGMLN
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atggtcacccccatcgcgacagcgacggcagttctctctcctccgcctcaccacgcggca
acgggccacagcgagcagctgctgcgtcgtcgtgcgagcctgactgccgacgatcccgac
cgcgcgcggctgcgagcccggatcatcgaggccaacctgccgctggccggtcggctggcg
cgccgctacaccggtcgcggagagccctacgaggacctggcacaggtgggcgcgctcgcc
ctgatcagggccgtcgacggatacgacaccgagcgggggacgccgttcgccagctacgcc
attccgaccattctcggcgccatgcggcggcacttccgcgacaccgcctgggcgatccgg
gtgccgcgcgcagcccaggaactgacgtaccgggtgcccgccgcccggagcgagttcggg
cagcgacgcggtcgcctaccgacggacggagaactcgccggccacctgaaggtgaccgtc
gccgaactcctggccgccctcgccgcctcggaggtctaccggttgccgtcgctgaacgag
ctgcagcccgggagcaacgccgtcgagcgcatcgcgctcatcggcgccgtcgatccgggg
tacgccgccgtggacgaccacatgacgctccggctggtcctcgcggcgctctccgcgcga
gagcgtcagatcctggccatgcgcttccacggcgacctgacccaggcggagatcgccggc
cgggtcgggttgtcgcagatgcacgtctcccggctgctgaagcgctccctggcccagctc
agggccgggatgctcaactga
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