Mannheimia haemolytica 89010807N lktA-: VK67_01240
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Entry
VK67_01240 CDS
T03750
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mhay
Mannheimia haemolytica 89010807N lktA-
Pathway
mhay03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhay00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VK67_01240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhay03021
]
VK67_01240
03400 DNA repair and recombination proteins [BR:
mhay03400
]
VK67_01240
Enzymes [BR:
mhay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VK67_01240
Transcription machinery [BR:
mhay03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VK67_01240
DNA repair and recombination proteins [BR:
mhay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VK67_01240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AKA12989
UniProt:
A0A248ZWH2
LinkDB
All DBs
Position
240112..244395
Genome browser
AA seq
1427 aa
AA seq
DB search
MKDLVKFLKAQTKSNEDFDVIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCA
RIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELACPVAHIWFLKS
LPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQLLTEEQFMDAEERWGDEFEAK
MGAEGIQALLRDLDLEHQCETLREELQETNSETKRKKITKRLKTLEAFLQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLVAPDIIVRNEKRML
QESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGP
YLRLHQCGLPKKMALELFRPFIYSKLENRGIASTIKAAKKMVEREDPIVWDILAEVIREH
PILLNRAPTLHRLGIQAFEPLLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNVLSPASGDPIIVPSQDVVLGLYYMTREKVNGKGEGMYFLDPREAEKAYRT
GQAELHSRVKVRVTEYEKNEAGELEAKTSLVDTTIGRSILWMIAPKGMPFSLFNQTLGKK
AISKLINESYRRLGLKESVVLADQIMYTGFAYAARSGASVGIDDMVIPEQKYAIIEAAEA
EVAEIQEQFNGGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEEVINREGNPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGA
RKGLADTALKTANSGYLTRRLVDVAQDLVIIEDDCGTHEGIVMTPLIEGGDVKEALRDRV
LGRVVAEDVLKPGTDEVLIPRNTLLDEKWCDVVDRESVDVIKVRSVVTCDTDFGVCAKCY
GRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNAGTIK
LTNAKFVTNKEGKIVLTSRNTELTVIDTFGRTKENYKVPYGAVLSKHDGAEVAVGEVVAN
WDPHTMPVISEVSGRIQFSDIVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPALR
LVDSNGKDILIPGTDVAAQYFLPGKAIVTLDDGAEIEVGEALARIPQESVGTKDITGGLP
RVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAFEEMIPKWRQLNVFE
GEMVQRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKINDKHIEVIVRQM
LRKAVITNAYDSEFLEGEQVEVARVKIANRKRAEEGKPLVEFERELLGITKASLATESFI
SAASFQETTRVLTEAAVAGKQDELRGLKENVIVGRLIPAGTGFAYHQARAKKRAQLEAGI
AVVPEFEAPAAKANSFVTDADIEAEFEFVADDATQSLAALLNAGEEE
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttagtgaagtttttaaaagcacaaacaaaatcgaacgaagattttgatgtg
attaaaattggtttagcatcaccggacaagatccgttcttggtcttttggtgaagtgaaa
aaaccggaaaccattaactatcgtaccttcaaaccggagcgtgatggtttattctgtgca
cgtattttcgggccggtaaaagattacgagtgcttgtgtgggaaatacaaacgtttaaaa
caccgtggcgtaatttgtgaaaaatgtggtgttgaagtaacccaaactaaagtacgtcgt
gagcgtatggggcacattgaattagcttgccctgtcgcacacatctggttcttaaaatca
ctaccgtcccgtatcggtttaatcttagatatgccgttgcgtgatattgaacgtgtgctt
tattttgaatcttatgtagttactgaaccgggaatgaccgatttagagaaaaatcagtta
ttaaccgaagaacaatttatggacgctgaagagcgttggggtgatgaatttgaagcgaaa
atgggtgcagaaggtatccaagcattacttcgtgatttagatttagaacaccaatgcgaa
accttgcgtgaagagttacaagaaaccaattcagaaaccaagcgtaaaaaaatcactaag
cgtttaaaaaccttagaagcattcttacaatccggcaacaaaccggaatggatggtgatg
acagtattaccggtacttccaccggatttacgtccgttagtaccgcttgacggtggacgt
tttgcgacttctgacttaaacgatttataccgccgtgtaattaaccgtaacaaccgttta
aaacgcttgttagatttagttgcaccggacatcatcgtgcgtaacgaaaaacgtatgtta
caagagtcggttgatgcgttattagacaacggtcgccgtggtcgtgcgattaccggttcg
aacaaacgtccgttaaaatctttggcagatatgatcaaaggtaaacaaggtcgtttccgt
caaaacttattaggtaaacgtgtagattactcaggtcgttcggtaattaccgtaggccca
tacttacgcttacaccaatgtggtttaccgaagaaaatggcgttggaattattccgtccg
tttatctactcaaaattagaaaaccgtggcattgcttcaactattaaagccgcgaagaaa
atggtagagcgtgaagatcctatcgtatgggatattcttgccgaagtgattcgtgaacac
ccgattctacttaaccgtgcaccaacacttcaccgtttaggtatccaagcgtttgagccg
ttattgattgaaggtaaagcgatccagttacacccactcgtgtgtgcggcgttcaatgcg
gacttcgacggtgaccaaatggcggttcacgttccattaacccttgaagcacagttagaa
gctcgtgcgttaatgatgtcaaccaacaacgtactttcaccggcaagtggtgatccgatt
atcgtaccgtctcaggacgttgtactcggtctttactatatgacccgtgagaaagtaaac
ggtaaaggtgagggaatgtacttccttgaccctcgtgaagcggaaaaagcataccgtacc
ggtcaggctgaattacattctcgtgttaaagtgcgtgttactgaatatgagaaaaacgaa
gcaggcgaattagaagcaaaaacttcgttagtagataccaccattggtcgttcaatctta
tggatgattgcaccaaaaggtatgccgtttagcttgttcaaccaaaccttaggcaaaaaa
gcgatctcgaaattaattaacgagagctatcgccgtttaggtttaaaagaatctgtggtt
ttagctgaccaaattatgtacaccggctttgcttatgctgctcgttctggtgcctcagta
ggtatcgacgatatggtaattccggagcaaaaatacgcaatcattgaagcggctgaagcg
gaagtcgctgagatccaagagcaattcaacggcggtttagtaacagccggtgagcgttat
aacaaagtgatcgatatttgggctgctgcaaacgaacgtgttgcgaaagcaatgatggaa
aacctttcaacggaagaagtaatcaaccgtgaaggtaatccggaaaaacaagcctcattt
aacagtatctttatgatggcggactccggtgctcgtggttctgctgcacagattcgtcag
ttagcgggtatgcgtggcttgatggctcgtccggacggttcgattatcgaaaccccaatt
actgcaaacttccgtgaaggtttgaacgtattacagtactttatttcaacccacggtgca
cgtaaaggtcttgccgatacggcattaaaaacagcgaactccggttacttaacccgtcgt
ttagttgatgtggcacaagatttagttatcattgaagatgactgtggtacgcacgaaggt
atcgtgatgacaccacttatcgaaggtggtgatgtgaaagaagccctgcgtgatcgtgta
ttaggtcgtgtggtggcagaagatgtgttaaaaccgggtacagatgaagtattaattcca
cgcaacaccttattagatgaaaaatggtgtgatgtggtggatcgtgaatctgtggatgtg
atcaaagtacgttcggtagtaacttgtgatacagacttcggtgtgtgtgctaaatgttac
ggacgtgacttggctcgtggtcacttaatcaaccaaggtgaagcggtcggtgttattgcg
gcacaatctatcggtgagccgggtacacagttaacgatgcgtacgttccatatcggtggt
gcggcttctgcggcagcaaaagaatctagcatccaagtgaaaaacgcaggtacgattaaa
ttaaccaacgctaaatttgtaaccaacaaagaaggcaaaatcgtattaacttctcgtaat
actgaattaactgtcatcgacaccttcggtcgtaccaaagaaaactataaagtgccttat
ggtgcggtgctttctaaacacgacggtgcagaagtggctgtgggtgaagtggttgcgaac
tgggatccgcacacaatgccggtaatctcagaggtatcaggtcgtatccaatttagcgac
atcgtagatggcttaaccgttactcgccaaaccgatgaattaaccggtttatcatctatc
gtggtgcaagatgtgggtgaacgtgcaaccgcaggtaaagatttacgtccggcattacgc
ttagttgatagcaacggcaaagacatcttaattccgggtacagacgttgcagcacaatac
ttcttaccgggtaaagcaatcgtaaccttagacgatggtgcagaaattgaagtcggtgaa
gccttagcccgtattccacaagaatctgtggggacgaaagatattaccggtggtcttcca
cgcgtagcagacttattcgaagcccgtaaaccgaaagagccggcaatcttggcggaaatt
tcaggtattgtgtcgttcggtaaagaaaccaaaggtaaacgccgcttggtaattactccg
gcggaaggcgaagcgtttgaagagatgattccaaaatggcgtcagctcaacgtatttgaa
ggcgagatggtacaacgtggtgatgtgatatcagacggtgcagaaactccgcacgacatc
ttacgcttacgtggcgttcacgccgttaccgactacatcgtaaacgaagtgcaagaagtt
taccgcttacaaggggtaaaaattaacgacaagcacatcgaagtgattgttcgccaaatg
ttgcgtaaagctgtgatcaccaacgcttacgactctgaattcttagagggcgaacaagtg
gaagtggctcgtgtgaaaattgccaaccgcaaacgtgctgaagaaggcaaaccgttggta
gaatttgaacgtgaattgcttggtattaccaaagcatctcttgcaacagaaagctttatt
tctgcagcctcgttccaagaaaccactcgagtgcttaccgaagccgcagtggcaggtaaa
caagatgaattgcgtggcttaaaagagaacgtaatcgttggtcgcttaatcccggcaggt
accggttttgcttaccaccaagcacgagctaaaaaacgtgcccaactggaagcaggaatt
gcagttgtccctgaatttgaagcaccggcagctaaagccaattcattcgttaccgatgca
gacatcgaagctgaatttgaatttgttgcagacgatgcaacccaaagtttagcagcgttg
ttaaatgcgggtgaggaagagtaa
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integrated database retrieval system
