KEGG   Mannheimia haemolytica 89010807N lktA-: VK67_07335
Entry
VK67_07335        CDS       T03750                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
mhay  Mannheimia haemolytica 89010807N lktA-
Pathway
mhay03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mhay00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    VK67_07335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhay03400]
    VK67_07335
DNA repair and recombination proteins [BR:mhay03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     VK67_07335
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      VK67_07335
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 EAD9 UB2H DUF5683 Mu_Gam-Sipho_Gp157-TOTE DUF87
Other DBs
NCBI-ProteinID: AKA14096
UniProt: A0A547EEU8
LinkDB
Position
complement(1444641..1446659)
AA seq 672 aa
MSKQGKPFILHSPFKPSGDQPSAIAKLTEGLNDGLAHQTLLGVTGSGKTFTIANVIAKLN
RPAMVLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDYYQPEAYVPASDTFIEKDASINE
QIEQMRLSATKSFLERRDTIVVASVSAIYGLGDVDAYMQMMLHLQVGAMIGQREILSRLA
ELQYTRNDQAFQRSTFRVRGDVIDIYPAESDEVALRVELFDDEIENLSLFDPLTGHSLGK
VPRYTIYPKTHYVTPRERILEAIEQIKVELADRRTYFIKENKLLEEQRIAQRTQFDIEMM
NELGYCSGIENYSRYLSGRKEGEAPPTLFDYMPADGILVIDESHVTVPQIGGMYRGDRAR
KETLVQYGFRLPSALDNRPLRFEEFERLSPQTIYVSATPGAYELEKNPDVVDQVVRPTGL
LDPIIEVRPVATQVDDLLSEIHKRVAVDERVLVTTLTKKMAEDLTDYLDEHGVRVRYLHS
DIDTVERVEIIHDLRMGMFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQT
IGRAARNLNGKAILYGDRITNSMQKAITETERRREKQMKYNEEHGITPQALNKKVGELLD
IGQSDKPKRGKQAVKKAENSATDYKPKSRKELEKELKTLEQQMRDFAKDLEFEKAAAVRD
KLQHLKAYLLEV
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgagcaagcaaggcaaaccctttatcctccattctcctttcaagccctccggcgaccaa
ccaagtgcgattgccaaattgaccgaaggcttaaatgacggcttggcacatcaaacctta
cttggcgtaaccggctcggggaaaacctttaccattgctaatgtgattgccaagctcaat
cgcccggcgatggtgcttgccccgaataaaacccttgccgcccagctttatgccgagatg
aaagcgttctttccggaaaatgcggtggagtatttcgtctcttactatgattactaccag
cccgaagcctatgtgccggcaagcgatacctttatcgagaaagatgcctctatcaatgag
cagatcgagcaaatgcgactttccgcaaccaaatcctttttggaacgccgagatacgatt
gtagtggcgtccgtttctgccatttacggcttgggtgatgtggacgcttatatgcagatg
atgttgcatttgcaagtgggggcgatgattgggcagcgtgaaattctctctcgccttgcc
gaattgcaatatactcgcaacgatcaggcgttccaacgttcgactttccgagtgcggggc
gatgtgattgatatttaccctgccgaaagcgatgaagtagcgttaagggtagagctgttt
gacgatgaaatcgaaaatctgtcgctgtttgatccgcttacagggcatagcttgggcaag
gtgcctcgctataccatttacccgaaaactcactatgtgacccctcgggaacggattttg
gaggcaatcgagcaaattaaggtcgagcttgccgaccgtcgcacctatttcatcaaagag
aataaattgctggaagagcagcggatcgcccaacgtacgcagtttgatattgagatgatg
aacgagctgggctactgttcgggcattgaaaactactcacgctatctctcgggcagaaaa
gagggcgaagcccctccgaccctgtttgattatatgccggcggacggtattttggtgatt
gatgaaagccacgttactgtgccacaaattggcggaatgtatcgaggcgaccgagcgaga
aaagaaacattggtgcaatacggtttccgtctgccgtctgcactggataaccgcccgttg
agatttgaagagtttgaacgtctttcaccacagacgatttacgtttctgccacaccgggg
gcgtatgaattggagaaaaatcccgatgtggtggatcaagtagttcgtccaaccggcttg
ctcgatccgattatcgaagttcgccccgttgctacgcaggtggacgatttactgtctgaa
attcacaaacgagtggcggtggacgaacgggtgctggtgacaacactcaccaaaaaaatg
gcggaagatctcaccgattatttggacgaacatggcgtacgagttcgttatctacatagc
gacattgacacggtggaacgggtcgaaattatccacgatttacgaatgggaatgtttgat
gtgctggtggggatcaacttattgcgtgagggcttagatatgcccgaagtgtcgctggtt
gccattcttgatgcggataaagagggatttttacgttccgaacgctcgttaattcagacc
atcggacgtgccgcccgaaacctcaacggaaaagcgattttatacggcgaccgcattacc
aactcaatgcaaaaagcaattactgagaccgaacgccgccgtgaaaagcagatgaaatac
aacgaagaacacggcatcacgccacaagcgttgaacaaaaaagtgggtgaattgctcgac
atcggacaatccgacaagccaaaacggggcaaacaagcggtcaaaaaagccgaaaattct
gcaaccgactacaagccgaaatcccgtaaagaactggaaaaagagcttaaaacgctggaa
caacaaatgcgtgattttgcgaaagatctggaatttgaaaaagcggctgcggtaagggat
aagttgcagcatttaaaggcgtatttgttggaggtttaa

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