Mannheimia haemolytica 89010807N lktA-: VK67_09545
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Entry
VK67_09545 CDS
T03750
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mhay
Mannheimia haemolytica 89010807N lktA-
Brite
KEGG Orthology (KO) [BR:
mhay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhay03019
]
VK67_09545
Enzymes [BR:
mhay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VK67_09545
Messenger RNA biogenesis [BR:
mhay03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VK67_09545
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
AAA_19
nSTAND3
ResIII
SLFN-g3_helicase
WHD_HA2
T2SSE
nSTAND_NTPase5
ABC_tran
NACHT
AAA_30
SRP54
AAA_23
PhoH
RsgA_GTPase
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AKA14493
UniProt:
A0A547EMM3
LinkDB
All DBs
Position
1871592..1875578
Genome browser
AA seq
1328 aa
AA seq
DB search
METPLQKNHKKPPLVKLENITTADFRRLLGRLKGAENIKNIDHKRSVLAEISQDLTACQA
RFFARTQHAQNLKIDYPDLPVSARREEILKLISENQVVVIAGETGSGKTTQLPKMCLELG
RGVKGLIGHTQPRRIAARSVATRIAEELKSELGETVGYKVRFNDQVSENSLIKLMTDGIL
LAEIQHDSYLNQYDTLIIDEAHERSLNNDFILGYLKQILHKRPDLKVIITSATIDVERFS
KHFNNAPIIEVSGRTFPVEVRYRPIVEDQDQLQGILNAVDELQAEGRGDILIFMNGEREI
RDTAEALQKQELRHSEILPLYARLSAAEQQRIFQPSGGLNRIILATNVAETSLTIPNIKY
VIDTGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTSEGICIRLYSEEDFNSRPQ
FTDPEILRTNLAAVILQMTSLGLSDIANFPFVDAPDSRQIQDGIRLLEELQAIIPNEKIP
STACGGGLGRGEIRSNDGTPPLPTSPRKRGDGFRLTPIGRQLAQLPVDPRLGRMVIEAAK
NGSLHEVMMIVSALSIQDPRERPQEKQQSADDKHRRFADKESDFLAFVNLWHFIQAQQKE
LSKNQFRNLCRKDYLNYNRVREWQDIYHQLRLAVREMGLKINSEPASYQPIHTALLAGLL
SHIGLKDNEKMHYLGARNAHFFIFPNSALFKKQPKWVMAAELVETTKLWGRMVARIEPEW
VEPLAVHLTKSSYSEPHWAKSKGAVMASEKVSLYGIPIVAQRSVNYGSIDPTVSREIFIR
SALVEGECHNNYKFFKENHRLIREVEALEHKSRRRDILVDEQVLFEFYDQRIGTEVVSSK
HFDTWWKQASKKDPELLNFEKSFLINDNANLASELDFPNFWHQGDLKLKLSYQFEVGKDH
DGVTVHIPLPLLNQVEPEGFDWQIPGLRHELIVSLIKSLPKSLRRNFVPAPNYADAFLGR
AEPFKKPLLDNLSHELRRMTGVLVEPEQWDLSQLPPHLRMTFRVIDDKGKKLQESENLDE
LKFALKDEVQNTLSNIADDGIEQSGVHIWNFAELPQFYEQKKAHFSVKAYPAIVDEQTAV
GVKLFETEFEQARAMQAGLRRLLLLNVPSPIKYLHEKLPNKAKLGLYFAPFGKVLELIDD
CIACAVDQLVEEFGGFVWTEEKFTQLHEFVRANLNDKTVEIAKQVEKCLTLAYELNKRLK
GKLDFTMAFALSDIKTQIEGLIYPDFVTKTGYARLADLYRYLTAIERRLDKLLVDSNTDR
AKMLRVEAVQEAYKQLLAKLPKSKAVPDEVLEIRYMIEELRVSLFAQQLGTKYPISDKRI
LNVINEIK
NT seq
3987 nt
NT seq
+upstream
nt +downstream
nt
atggaaacacctttgcaaaaaaatcataagaaaccaccgcttgtgaagctggaaaatatc
accaccgccgatttccgccgcctgctcggtcgcttaaaaggggcggaaaatattaaaaac
atcgatcacaagcggtcagttttggcagaaatttcgcaagatctcaccgcttgtcaggca
cgttttttcgcacgaactcagcacgcccaaaacctgaaaattgactaccctgatctgcct
gtttccgctcgccgtgaggaaattttaaaactgattagcgaaaatcaggtggtggtgatc
gcaggggaaaccggttcgggcaaaaccacccagttaccgaaaatgtgcttagaactcggg
cgtggggtgaagggcttgattgggcatacccagccccgccgaattgccgcacgttcggtg
gcgactcgcattgccgaagagctgaaatcggaactgggcgagacggtcggttacaaagtc
cgctttaacgatcaagtcagtgaaaacagcttaatcaagctaatgacggacggtattctg
ctggcggaaatccagcacgacagctatttaaatcagtacgatacgctgattattgacgaa
gctcacgagcgttcgctgaacaacgattttattttgggttatctgaaacaaattctgcac
aaacgccccgatctgaaagtgatcatcacctcggcaactattgatgtagaacgtttttcc
aaacatttcaacaacgccccgattattgaagtctctggtcggacattcccggtggaagtg
cgttatcgcccgatagtggaagatcaagatcaactgcaaggtattctaaatgcggtggac
gaactgcaagccgaagggcgtggcgatattctgatttttatgaacggtgaacgggaaatt
cgtgacactgccgaagccttgcaaaagcaggaactgcgacatagcgaaattttacccctt
tacgcccgcttatcggctgccgaacaacaacggattttccagccaagcggtgggctaaac
cgaattattctggcgaccaacgtggcagaaacctccctcactattccgaatattaaatat
gtgatcgacaccggcacggctcgtatttctcgttatagctaccgcaccaaagtgcaacgc
ttgccgattgagccgatttcgcaagcctccgccaaccagcggaaagggcgttgtgggcga
acctcggaagggatctgtatccgcctctattcagaagaggatttcaacagccgtccacaa
tttaccgatcctgaaattctacgaactaaccttgcagcggttattttacaaatgacttcg
cttggattgagtgatattgccaatttcccgtttgttgatgcccctgacagccgacaaatt
caggacgggattcggttgttggaagaattacaggcgattattccaaatgaaaaaatcccc
tccaccgcttgcgggggagggctagggaggggggaaatccgttctaatgatggcactccc
cccctcccaacctccccccgtaaacggggggatgggtttagattaaccccaatcggtcgc
caactcgcccaactgccagtcgatcctcgcttaggcagaatggtgatcgaggcggcgaaa
aacggttcgttgcacgaagtgatgatgattgtgtcagctctctcaatccaagaccctcgt
gagcgtccgcaggaaaaacagcagtcggcagacgataaacaccgccgttttgccgataaa
gagagcgatttcttagcctttgtgaatttgtggcactttatccaagcccaacaaaaagaa
ctgtcgaaaaaccagttccgtaatctctgccgtaaggattatttgaactacaaccgtgtg
cgggagtggcaggatatctaccaccaactccgccttgcagttagagaaatgggcttaaaa
attaacagtgagccggcaagttatcagccgattcacaccgccctgctcgccggcttgttg
tcgcatatcggcttgaaagataatgaaaaaatgcactatttaggagcaagaaatgcccac
tttttcattttcccgaactcggcacttttcaaaaaacagccgaaatgggtaatggccgca
gagctggtggaaactaccaaactttggggacgaatggtcgctcgcattgagccggaatgg
gtggaaccgttggcagtacacctcactaaatccagttacagcgaaccacactgggcgaag
tcaaaaggagcggtaatggcatcggaaaaagtgtcgctctacggcattccgattgtggca
caacgctcggtgaattatggctcgatagacccaaccgtcagccgtgagatttttatccgc
tcggcgttggtggaaggcgaatgtcacaacaattacaaatttttcaaagaaaatcaccgc
ttgatccgtgaagttgaggcattggaacacaaatcccgccgccgtgatattttggtggac
gagcaggtgctgtttgagttttacgatcagcggattggcaccgaagttgtgtcgagcaag
cattttgatacttggtggaaacaggcaagcaaaaaagatcctgaactgctgaactttgaa
aaatcgttcctgatcaacgacaacgccaaccttgccagcgagctggatttcccgaatttc
tggcatcaaggcgatttaaaactcaaactgagctatcagtttgaggtcggaaaagatcac
gatggcgtgacggtgcatattccgctaccgctgcttaaccaagtggaacccgaaggtttc
gattggcaaattccggggctacgccacgagctgatcgtctcgctgattaaatctttaccg
aaatcgctacggcgaaattttgtgccggcgccgaattatgcggacgcctttttagggcga
gccgagccgtttaaaaaaccgttgctggacaatctaagccacgaactacgccgaatgacg
ggtgtattggtcgagcctgaacagtgggatttaagccaactgccgccacatttgcggatg
actttccgtgtgattgatgataaaggcaagaaactgcaagagagcgaaaaccttgatgag
ctgaaatttgccttgaaagatgaggtgcagaacaccctttccaacattgccgatgacggc
attgagcaaagtggtgtgcatatttggaattttgccgaattgccacagttctatgagcag
aaaaaagcccatttcagcgtgaaagcctaccctgcgattgtcgatgaacaaacggctgtg
ggggtgaaactgtttgaaacggaatttgagcaggctcgtgcaatgcaggcaggacttcgc
cgtctgctgttgctaaatgtgccatcgccgattaaatatctacacgaaaaactgccgaac
aaagccaagctgggcttatattttgccccgttcggcaaagtattggagctgattgacgac
tgcattgcctgtgcggtagatcagctggtagaagagttcggcgggtttgtctggacggag
gaaaaattcacccaactgcacgaatttgtgcgggcaaatttaaacgataaaaccgtagaa
attgccaaacaggttgaaaagtgcctcacactggcctacgagctaaacaagcggttaaaa
ggcaagctcgattttacgatggcgtttgcgttaagcgacatcaaaacccaaatcgaaggg
ctgatttaccccgactttgtcaccaaaaccggctacgcccgccttgcagatttataccgt
tatttgaccgctatcgaacgccgtttggataaactgttggtggacagcaacaccgaccga
gccaaaatgctacgggtggaagcagtgcaagaggcatataaacagctccttgccaaactg
ccaaaatccaaagcggtgccggacgaggtactggaaattcgatatatgatcgaagaactg
cgggtcagtctgttcgctcaacagctcggcacaaaatacccgatttcggataagcggatt
ttgaatgtgatcaatgaaataaagtaa
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