Methanohalophilus halophilus: BHR79_00470
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Entry
BHR79_00470 CDS
T04572
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
mhaz
Methanohalophilus halophilus
Pathway
mhaz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mhaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BHR79_00470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhaz03400
]
BHR79_00470
DNA repair and recombination proteins [BR:
mhaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHR79_00470
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BHR79_00470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
AAA_22
DnaJ_CXXCXGXG
AAA_18
Viral_helicase1
AAA_21
nSTAND1
APS_kinase
nSTAND3
AAA_23
AAA_33
AAA_24
T2SSE
SLFN-g3_helicase
cobW
PRK
NACHT
MMR_HSR1
AAA_25
NTPase_1
MeaB
BCA_ABC_TP_C
Septin
zinc_ribbon_9
IIGP
Motif
Other DBs
NCBI-ProteinID:
APH38101
UniProt:
A0A1L3Q016
LinkDB
All DBs
Position
complement(93694..96519)
Genome browser
AA seq
941 aa
AA seq
DB search
MSLKNIMIKGAKEHNLKNIDVVLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
SYARQFLGQMEKPDVEYIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARIGVR
HCPDCGRTIEPQSVDQIVDNIMKFPAKTKLHILAPVVRERKGEYRKLLADIRSDGYSRAR
VDGEITRLDEADSLELGRYNKHNIEIVVDRLSIKEGIEERLSDSVEQALARSGGIVIADI
VDGDEFVFSEKLACPHCGSGFEELEPAMFSFNSPQGACDVCHGLGTSMEFDPDLIIPDSS
LSLNEGAVEPWGTRKDGYYMQSLQSLADHFGFSMDAPFEDLEPQYQNMILYGTATKVPMV
HTGKGGGIWKRNSRFKGVIAAISKIYNRTDSENTKDRLKRYISTKPCPACEGERLKPANL
SVFIDGFNIIQTTHMSIEDCLHFFEKLELHLNQREFTIARLILKEIKSRLGFLVDVGLDY
LTLSRSASTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNLRLINTLKHLRDI
GNTVIVVEHDEETIMSADHVVDMGPGAGIHGGGLVAEGTPLEIMQNPDSLTGKYLERKLK
IPVPSERRTPEGFIKLIGAGENNLKEIDVEFPLSVMICVTGVSGSGKSTLINETLNKVLA
RKLNRARERTGKYSAIEGLENVDKVITIDQSPIGRTPRSNPATYTNLFTPIRELFAQTKL
SKSRGYKPGRFSFNVRGGRCETCGGEGIITIEMHFLPDVYVPCEVCHGKRYNRETLEVTY
KDKSIADVLDMTVEEALGFFENVPKIKRKLQTLFDVGLGYIKLGQSSTTLSGGEAQRVKL
ATELSKRSTGQTVYILDEPTTGLHFDDVRKLLEVLQRLVEGGNTVIVIEHNLDVIKVADW
IIDLGPEGGEGGGRVVAEGVPENVAKVEGSYTGEFLKNILS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcaaaaacataatgataaagggtgccaaagagcacaatttaaagaatattgat
gtagtgttgcccagggataaattgattgttatcacgggtttaagtggctcgggcaagtca
tctcttgcttttgatacgatctatgccgaaggccagcgtcgctatgttgaatcgctttca
tcatatgcccggcaattcctggggcagatggaaaaacccgatgttgaatacattgaaggt
ctatctcctgctatttccatcgaacagaaaaccaccagcaagaatccccgctctaccgtg
ggtaccgttaccgagatatacgattacctgagattgctgtttgcccgtataggggttcgc
cactgcccggattgtggacgtacaatcgagccccagagtgttgaccagattgtggacaac
ataatgaaattccctgcaaaaaccaaactacacatcttggcgcctgttgtacgggagcgt
aaaggggaatacaggaaacttctcgctgacatccgttctgacggttattcccgtgcacgt
gtggatggggagataacccggctagatgaagctgattccctggaattggggcgctacaat
aaacataatatcgaaattgtggttgacaggctttccatcaaagaaggaatagaagagcgc
ctctctgattcagtggaacaggcccttgccagaagtggcggtattgttatagctgatatt
gtcgatggtgacgaatttgtcttcagcgaaaaactcgcctgtcctcattgtggtagcggt
tttgaggagctggagcctgccatgttttcctttaacagcccccagggagcatgtgatgta
tgtcacggcctgggaacttctatggaattcgatccggacctaataatccctgacagttcc
ctgtctctcaatgaaggagcagttgaaccgtggggtacgagaaaagatggctattacatg
cagtctctccagtctcttgctgatcatttcggattttctatggatgctccgtttgaagat
ctggagccacagtatcagaatatgattctctatgggacggctaccaaggtcccgatggtc
cataccggtaaaggtggaggtatctggaaacgcaacagtcgctttaaaggtgtaattgct
gccatttccaagatatacaatcgcacagattcagagaataccaaggaccggctcaaacgg
tatataagcaccaaaccatgtccggcctgtgaaggtgaaaggctcaagccagccaatctg
tctgttttcatagacgggttcaatataatccagacaactcatatgtctattgaggattgt
ctccatttctttgaaaaactggaacttcacctgaaccagcgggaatttaccatagcccgc
ctgatattgaaagaaattaagtccagactgggttttttggttgatgtgggtcttgattat
ctaactttgagtcgttcagcatccactctttcgggaggggaggcccagcgtatccgtctt
gccacccagataggttccagcctgatgggagtactgtacattctggatgaaccgagtatt
ggtttgcatcagcgggataatctaaggcttatcaacactctcaaacacttacgtgatatc
ggtaacaccgttattgttgtggagcatgatgaagaaacaataatgagcgccgatcatgtt
gtggatatggggcccggagctggtattcatggaggtggtctggtagcggagggaactcct
ttggaaattatgcaaaacccggattctctcacagggaaataccttgagaggaaactaaag
attccggttccgtcggaaaggcgtactcctgagggtttcataaaattgataggagctggt
gaaaacaatctcaaggaaattgatgtggaatttcctctttctgtaatgatatgtgtaacc
ggggtttcagggtcaggtaaaagtacacttatcaatgaaaccctgaataaagtgttagcc
cgcaaactcaatcgtgccagggagagaaccggaaaatattccgctatcgaaggtcttgaa
aatgttgataaggtaattacaatagaccagtctcccattggcaggactcccagatccaat
ccggctacctataccaatctcttcacacccatacgtgaattatttgcccagacaaaactt
tccaaatcccgcggctataaaccgggtcgtttcagtttcaatgtacgtggaggccgttgt
gagacctgtggcggggagggaataatcactattgaaatgcactttttgcccgatgtttat
gtgccctgtgaagtctgtcatggcaaacggtataacagggaaacccttgaggtcacttac
aaggataaaagcatagccgatgtactggatatgaccgtggaagaagctcttggttttttt
gagaatgttccaaaaataaaacgtaagttacaaacgctttttgacgttggtctgggctac
atcaaactaggccagtcttcaactacgctttcaggaggggaagcccagcgtgtcaaactt
gctactgaactgagtaaacgctctaccggccaaacagtgtatattcttgatgaaccaacc
accggattgcattttgatgatgtcaggaagttacttgaagtgctccagcgccttgtagag
ggaggcaatacagtaattgtcatagagcacaatctggatgttataaaggttgcagattgg
attattgaccttggtcctgaaggtggagaaggtggaggacgtgttgttgcagaaggagtg
cctgaaaatgtggcaaaggtcgaaggttcctatacaggtgaatttttgaaaaatattctc
tcctga
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