KEGG   Methanohalophilus halophilus: BHR79_00470
Entry
BHR79_00470       CDS       T04572                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
mhaz  Methanohalophilus halophilus
Pathway
mhaz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mhaz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BHR79_00470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhaz03400]
    BHR79_00470
DNA repair and recombination proteins [BR:mhaz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BHR79_00470
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BHR79_00470
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase AAA_22 DnaJ_CXXCXGXG AAA_18 Viral_helicase1 AAA_21 nSTAND1 APS_kinase nSTAND3 AAA_23 AAA_33 AAA_24 T2SSE SLFN-g3_helicase cobW PRK NACHT MMR_HSR1 AAA_25 NTPase_1 MeaB BCA_ABC_TP_C Septin zinc_ribbon_9 IIGP
Other DBs
NCBI-ProteinID: APH38101
UniProt: A0A1L3Q016
LinkDB
Position
complement(93694..96519)
AA seq 941 aa
MSLKNIMIKGAKEHNLKNIDVVLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLS
SYARQFLGQMEKPDVEYIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLFARIGVR
HCPDCGRTIEPQSVDQIVDNIMKFPAKTKLHILAPVVRERKGEYRKLLADIRSDGYSRAR
VDGEITRLDEADSLELGRYNKHNIEIVVDRLSIKEGIEERLSDSVEQALARSGGIVIADI
VDGDEFVFSEKLACPHCGSGFEELEPAMFSFNSPQGACDVCHGLGTSMEFDPDLIIPDSS
LSLNEGAVEPWGTRKDGYYMQSLQSLADHFGFSMDAPFEDLEPQYQNMILYGTATKVPMV
HTGKGGGIWKRNSRFKGVIAAISKIYNRTDSENTKDRLKRYISTKPCPACEGERLKPANL
SVFIDGFNIIQTTHMSIEDCLHFFEKLELHLNQREFTIARLILKEIKSRLGFLVDVGLDY
LTLSRSASTLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNLRLINTLKHLRDI
GNTVIVVEHDEETIMSADHVVDMGPGAGIHGGGLVAEGTPLEIMQNPDSLTGKYLERKLK
IPVPSERRTPEGFIKLIGAGENNLKEIDVEFPLSVMICVTGVSGSGKSTLINETLNKVLA
RKLNRARERTGKYSAIEGLENVDKVITIDQSPIGRTPRSNPATYTNLFTPIRELFAQTKL
SKSRGYKPGRFSFNVRGGRCETCGGEGIITIEMHFLPDVYVPCEVCHGKRYNRETLEVTY
KDKSIADVLDMTVEEALGFFENVPKIKRKLQTLFDVGLGYIKLGQSSTTLSGGEAQRVKL
ATELSKRSTGQTVYILDEPTTGLHFDDVRKLLEVLQRLVEGGNTVIVIEHNLDVIKVADW
IIDLGPEGGEGGGRVVAEGVPENVAKVEGSYTGEFLKNILS
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgtctctcaaaaacataatgataaagggtgccaaagagcacaatttaaagaatattgat
gtagtgttgcccagggataaattgattgttatcacgggtttaagtggctcgggcaagtca
tctcttgcttttgatacgatctatgccgaaggccagcgtcgctatgttgaatcgctttca
tcatatgcccggcaattcctggggcagatggaaaaacccgatgttgaatacattgaaggt
ctatctcctgctatttccatcgaacagaaaaccaccagcaagaatccccgctctaccgtg
ggtaccgttaccgagatatacgattacctgagattgctgtttgcccgtataggggttcgc
cactgcccggattgtggacgtacaatcgagccccagagtgttgaccagattgtggacaac
ataatgaaattccctgcaaaaaccaaactacacatcttggcgcctgttgtacgggagcgt
aaaggggaatacaggaaacttctcgctgacatccgttctgacggttattcccgtgcacgt
gtggatggggagataacccggctagatgaagctgattccctggaattggggcgctacaat
aaacataatatcgaaattgtggttgacaggctttccatcaaagaaggaatagaagagcgc
ctctctgattcagtggaacaggcccttgccagaagtggcggtattgttatagctgatatt
gtcgatggtgacgaatttgtcttcagcgaaaaactcgcctgtcctcattgtggtagcggt
tttgaggagctggagcctgccatgttttcctttaacagcccccagggagcatgtgatgta
tgtcacggcctgggaacttctatggaattcgatccggacctaataatccctgacagttcc
ctgtctctcaatgaaggagcagttgaaccgtggggtacgagaaaagatggctattacatg
cagtctctccagtctcttgctgatcatttcggattttctatggatgctccgtttgaagat
ctggagccacagtatcagaatatgattctctatgggacggctaccaaggtcccgatggtc
cataccggtaaaggtggaggtatctggaaacgcaacagtcgctttaaaggtgtaattgct
gccatttccaagatatacaatcgcacagattcagagaataccaaggaccggctcaaacgg
tatataagcaccaaaccatgtccggcctgtgaaggtgaaaggctcaagccagccaatctg
tctgttttcatagacgggttcaatataatccagacaactcatatgtctattgaggattgt
ctccatttctttgaaaaactggaacttcacctgaaccagcgggaatttaccatagcccgc
ctgatattgaaagaaattaagtccagactgggttttttggttgatgtgggtcttgattat
ctaactttgagtcgttcagcatccactctttcgggaggggaggcccagcgtatccgtctt
gccacccagataggttccagcctgatgggagtactgtacattctggatgaaccgagtatt
ggtttgcatcagcgggataatctaaggcttatcaacactctcaaacacttacgtgatatc
ggtaacaccgttattgttgtggagcatgatgaagaaacaataatgagcgccgatcatgtt
gtggatatggggcccggagctggtattcatggaggtggtctggtagcggagggaactcct
ttggaaattatgcaaaacccggattctctcacagggaaataccttgagaggaaactaaag
attccggttccgtcggaaaggcgtactcctgagggtttcataaaattgataggagctggt
gaaaacaatctcaaggaaattgatgtggaatttcctctttctgtaatgatatgtgtaacc
ggggtttcagggtcaggtaaaagtacacttatcaatgaaaccctgaataaagtgttagcc
cgcaaactcaatcgtgccagggagagaaccggaaaatattccgctatcgaaggtcttgaa
aatgttgataaggtaattacaatagaccagtctcccattggcaggactcccagatccaat
ccggctacctataccaatctcttcacacccatacgtgaattatttgcccagacaaaactt
tccaaatcccgcggctataaaccgggtcgtttcagtttcaatgtacgtggaggccgttgt
gagacctgtggcggggagggaataatcactattgaaatgcactttttgcccgatgtttat
gtgccctgtgaagtctgtcatggcaaacggtataacagggaaacccttgaggtcacttac
aaggataaaagcatagccgatgtactggatatgaccgtggaagaagctcttggttttttt
gagaatgttccaaaaataaaacgtaagttacaaacgctttttgacgttggtctgggctac
atcaaactaggccagtcttcaactacgctttcaggaggggaagcccagcgtgtcaaactt
gctactgaactgagtaaacgctctaccggccaaacagtgtatattcttgatgaaccaacc
accggattgcattttgatgatgtcaggaagttacttgaagtgctccagcgccttgtagag
ggaggcaatacagtaattgtcatagagcacaatctggatgttataaaggttgcagattgg
attattgaccttggtcctgaaggtggagaaggtggaggacgtgttgttgcagaaggagtg
cctgaaaatgtggcaaaggtcgaaggttcctatacaggtgaatttttgaaaaatattctc
tcctga

DBGET integrated database retrieval system