Methanohalophilus halophilus: BHR79_04985
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Entry
BHR79_04985 CDS
T04572
Name
(GenBank) RNA-binding protein
KO
K07573
exosome complex component CSL4
Organism
mhaz
Methanohalophilus halophilus
Pathway
mhaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHR79_04985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhaz03019
]
BHR79_04985
Messenger RNA biogenesis [BR:
mhaz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
BHR79_04985
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
BHR79_04985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
ECR1_N_2
Zn_ribbon_NUD
S1
HypA
DZR
Zn_ribbon_3
CheY-binding
Cas12f1-like_TNB
Ten1
Trm112p
Zn_ribbon_IS1595
DUF7130
Motif
Other DBs
NCBI-ProteinID:
APH39890
UniProt:
A0A1L3Q4T6
LinkDB
All DBs
Position
complement(1001283..1001843)
Genome browser
AA seq
186 aa
AA seq
DB search
MEEQFVLPGDIVGTNEEYEAGEGTYTLRGNIYSTRTGNVEVDRKKRNVSVRATSELPPVI
KKDDIVVGNVVNVRDSMALVQIAAIKGHGEREVNNPGIAAIHISNIKEDYVKNIANELAL
MDVVKAKVIDTDSMRLSIAAKELGVMSAVCGRCGEPLAIEEGKLKCPACGKTEKRKLSAD
YGTGII
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
attgaagagcagtttgtgctgcccggtgatattgttggtactaatgaagagtatgaagcc
ggtgaagggacctatacattaagaggaaacatatattcaaccaggacaggaaatgttgag
gttgacaggaaaaagcgtaatgtttccgtgcgggctacatccgaacttccacctgtaata
aagaaagatgatattgtagttggcaatgtggtgaatgtacgtgactcaatggcacttgta
cagatagcagccattaaaggccatggagaaagggaagtcaacaatcccggaattgccgcc
attcacatatcaaatatcaaggaagattacgtcaaaaacatagccaatgagcttgctctt
atggatgttgttaaggcaaaggtgattgatactgatagcatgcgcctgagcattgctgcc
aaggaactgggagttatgtccgcagtttgtggccggtgtggtgaaccccttgctattgaa
gagggaaaactgaaatgtcccgcctgtggcaagactgaaaagcgtaaactttcagctgat
tatggaacaggaataatctaa
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