Methanohalophilus halophilus: BHR79_06600
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Entry
BHR79_06600 CDS
T04572
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mhaz
Methanohalophilus halophilus
Brite
KEGG Orthology (KO) [BR:
mhaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhaz03016
]
BHR79_06600
Enzymes [BR:
mhaz01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
BHR79_06600
Transfer RNA biogenesis [BR:
mhaz03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
BHR79_06600
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
Motif
Other DBs
NCBI-ProteinID:
APH39186
UniProt:
A0A1L3Q2T4
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All DBs
Position
complement(1295673..1296725)
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AA seq
350 aa
AA seq
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MIGKLKEDRVVAGKEAIEEIYETSYYGRPKNDNLILTLVEAAHLLYREKLEIEKEGESLG
FEEYFKNASLLNPYFELKYIVYKDLRERGFYVQPGVADFRVYPRGGKPGKSSSRSYVYVH
SERVALPLSVLLKNLESAGNVRKQLIIAVVDEESDITYYEVQESDPTGNMEQLYPSLQTP
ATMLEDRVIVWDGEASGKLYENGFYGKPLDQKRLQLSLVEGAFLLKNNIIEVTTRKDDNK
LNFDEFCKRAAHIEPLFQRKYRVYEDLRTRKLVPKTGFKFGTHFRVYSEVKSASKIPHSE
YLAHSIGTQHEFSLPVMSRAIRLANSVRKKMLFAIEADEIRHIDITRVKM
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgataggaaaattgaaagaagacagggttgttgccggcaaagaggcaattgaagagata
tatgaaaccagttattacggcagacccaaaaacgacaatttaatactcaccctggttgaa
gcagcacacctgctttaccgcgagaaactcgaaattgaaaaagaaggcgaatcacttgga
tttgaagaatatttcaaaaatgcatccctgttaaacccttattttgaactcaaatatatt
gtatataaggaccttcgagagcgtggattttacgttcagcctggagttgcggatttcagg
gtatatccgcggggtggcaaacccgggaaatcctcatccagaagttatgtgtatgtccat
tcggaaagagtggccctacccctctctgtccttctgaaaaatctggaatctgccggcaac
gtgcgcaaacagctcataattgcagttgtggacgaagaaagcgacattacctattatgaa
gtgcaggaatcagaccctacaggtaatatggaacaactgtatccttcactgcaaactcct
gcaacaatgcttgaagatcgtgtcattgtctgggacggtgaagcttccggtaaactgtac
gaaaatggtttttatggcaaacccctggaccagaaacgtctacaactgtctcttgtagaa
ggcgctttcctgctaaagaacaacataattgaagtaaccacacgaaaagatgacaataaa
ctcaattttgatgaattctgcaaaagggccgcgcatatcgagcctcttttccagaggaaa
tacagggtgtacgaagacctcaggacccggaaactcgtacctaaaaccggattcaagttt
ggtactcatttcagggtctacagcgaagtgaagtccgcatcaaagattcctcattccgaa
tacctggcccactcgatcggcacacaacatgaattttccctaccagttatgtcaagggca
atcaggctggccaacagtgtgcgtaaaaaaatgctctttgcaatcgaagccgatgaaata
cgtcatattgatattacacgtgtgaaaatgtaa
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