Methanohalophilus halophilus: BHR79_07425
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Entry
BHR79_07425 CDS
T04572
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhaz
Methanohalophilus halophilus
Pathway
mhaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHR79_07425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhaz03019
]
BHR79_07425
03400 DNA repair and recombination proteins [BR:
mhaz03400
]
BHR79_07425
Enzymes [BR:
mhaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BHR79_07425
Messenger RNA biogenesis [BR:
mhaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BHR79_07425
DNA repair and recombination proteins [BR:
mhaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BHR79_07425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
APH39325
UniProt:
A0A1L3Q393
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All DBs
Position
1448404..1450203
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AA seq
599 aa
AA seq
DB search
MRQTLYDYFGYDKFRPLQENIIQDVLDKKDVFVLMPTGGGKSLCYQLPSLLMEGVTVVVS
PLISLMKDQVDRLLSRGIAAAYMNSTLDSSEMSHVKDSLIRGKLDLLYVAPERLAMPSTL
KLLAKANVNLFAVDEAHCISQWGHDFRPEYRKLGALRSGFPDVPLIALTATATPAVARDI
TKQLNMVRSEKYVASFNRTNLYYEVKSGENADQQITSYLRSHPESSGIIYCQTRKSVEGL
AGRLKKLGVNAAFYHAGMSDELRHRAQEKFLNGTIRVVVATVAFGMGIDKSNVRFVMHYD
LPADLESYYQQTGRGGRDGQPCDCILFFKRGDWYKQQYFIEQMSSKKEREIALSKLRLMM
DYCETVTCRRKILLEYFGESTEKDCGYCDVCLNPPQQVDVTEDALIIFKCIKELNQKFGA
THVASVIAGSKAKKIVSCGHHRLHCHGNGSHNPQDYWKDLSHRLSSLGFLEVKGGRYPVL
KLNKKSRATLNDGANVIVPQSSAATNSKKKPAGQSKVSSKSSTVDCEYSKLFEKLRRLRL
QFAKRDNVPPYIVFADTSLKQMASSKPQTANQMLTITGVGKCKLEKYGDAFLSEIKSFC
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaaaccctctacgactattttggttatgacaaatttcgacccctgcaggaaaat
attattcaggatgtgctggataaaaaagatgtatttgtattgatgccaaccggcggtggc
aaatctttgtgttaccagttgccttccctgcttatggagggtgttactgtcgttgtgtcc
cctttgatatcccttatgaaagatcaggttgacaggttgctttcacgtggcattgccgct
gcctacatgaacagtacacttgatagttctgaaatgagccatgttaaggattctctaata
aggggaaagctcgatcttctctatgtggcccccgaaagactggctatgccgtccactctt
aaattgcttgcaaaagcaaatgtaaatctttttgccgttgatgaagcacattgtatatcc
cagtgggggcatgatttcagacctgaatacagaaaattaggtgccctgcgctccggtttt
ccagatgttcctctaatagcacttacagctactgcgactcctgcagttgcccgtgatata
acaaaacaactcaatatggtcaggtctgaaaagtatgtagcaagttttaatcggaccaac
ctttattatgaggttaaatcaggggagaatgcagatcaacaaatcacatcatacctgcgc
tctcatcctgaatcctccgggattatttattgccagacacgaaaatccgtagaaggactt
gctggcagactgaaaaaattaggagtcaatgcggcattctatcatgccgggatgtcagat
gaactgagacaccgtgctcaggaaaagttcctgaatggtactataagggtagttgtggca
acagttgcatttgggatgggcatcgataagtccaatgtacgttttgtcatgcattatgac
ctgccagcggacctggaaagttattatcagcaaaccggcaggggtggcagggacgggcaa
ccctgtgattgtatcctttttttcaagagaggggattggtataaacagcaatactttatt
gaacagatgtcttctaaaaaagaacgtgaaattgccctttccaagttacgcctaatgatg
gattactgtgaaacagtcacctgtagaaggaaaatcttactcgaatacttcggagaatcc
accgaaaaagattgtggctattgtgacgtttgccttaacccgccacagcaggtggatgtt
acagaagatgcattaattatttttaagtgcataaaggagttgaaccagaaattcggggca
acacatgttgcatcggtaattgcaggttcaaaggctaaaaaaattgtgtcatgtggtcac
caccgactccattgtcatggtaatggttcccacaatccgcaagattactggaaagacctt
tctcatcggctctcttccctgggatttctggaagtgaaaggtggaagatatccggtctta
aaattaaataagaaaagtcgtgcgactctcaatgatggtgctaatgtaattgtacctcaa
tcatctgctgcaacaaattcaaagaaaaaaccagccgggcaaagcaaggtttcttcgaag
tcatctactgttgattgtgaatattcgaagttatttgaaaaactgcgcagactcaggttg
caatttgcaaaaagggataatgtgccaccctacattgtctttgcggataccagtttgaag
cagatggcttccagcaaaccccaaactgcaaaccagatgctcaccataacaggagtcggt
aaatgcaaacttgaaaaatacggtgatgcttttttgtcagagatcaaaagtttttgttga
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