Candidatus Mycoplasma haematominutum: MHM_05400
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Entry
MHM_05400 CDS
T02582
Name
(GenBank) conserved hypothetical protein (Zn-dependenthydrolase)
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mhb
Candidatus Mycoplasma haematominutum
Pathway
mhb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MHM_05400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhb03019
]
MHM_05400
Messenger RNA biogenesis [BR:
mhb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MHM_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
Motif
Other DBs
NCBI-ProteinID:
CCE67058
UniProt:
G8C410
LinkDB
All DBs
Position
complement(504549..506213)
Genome browser
AA seq
554 aa
AA seq
DB search
MSIKYYSLGGQDERFRYSGVLELHGDVFLLNAGASCVNANLYDIEEIIPDYKILLPLKSR
LKGVFIGVPRELNISSIPYLLQMFPNLPIYTNSFGAEIINSFLARFESVKGKRISPKIIT
LDLVSEHSVTTDVKVVPIKVAATLPNSLAWAFKFSQSEYVVFIDEFVVASENLPCRDNQL
NVLFQNLKSKVSLLIIGTQSCATVSTFALKPSDNFVYLKKLVSRINTRLIVAIYLDDWYT
IFNLSKIAYIYRYNFSIFPDELSVQFNSFLEKNKLKEYMSSVNELNSDGKKVQIVVVAGT
HNTLYSYLRKILEGVEPRLKLIPKDVIIFMTNTFIEKELEEISTINELARNGGEVLKAPS
SLVPYMAGAEDIMLLVNCLSPYNVVPVNGFYKDYVEFNKSLSNVMNPRKIHFLENGNYIT
LDRKNVTVIENEISEVYVSGQEMLDINRNTLFERKLLAQSGVIIIAIRCNNKKNVISKPI
VKMMSVFAKDFQKQDEALTQVKNYLRQDLSKYLQFNSEIDNRSLKQTIRKSVYHALDPFL
FRKPSILAVISHLH
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtctattaagtactattctttagggggtcaagacgagagatttagatatagtggagta
ttagagttacatggagatgtttttttactaaatgcaggggctagttgcgttaatgcaaat
ctatatgatattgaggagattattccagattacaaaatattattacccttaaagtctcga
cttaagggagtatttataggagttcctagagagttaaatatttcttcaatcccctattta
ctccagatgtttcctaatttacctatttatacaaactctttcggtgcggaaatcattaat
tcttttctcgcgagatttgaaagtgttaagggaaaaagaatttcaccaaaaattattact
ttagatttagttagtgagcactctgtaactacagatgtaaaggtagttcctataaaagtg
gccgcaactttaccgaactctctagcctgagcttttaaattttctcagtcagagtatgta
gtatttattgatgaatttgtagtcgcttcagaaaatttaccatgtagggataatcagtta
aatgtcttatttcagaatttaaaaagtaaagtttcacttttaattattgggacacaatct
tgcgctacagtttcgactttcgccttaaaaccttcagataattttgtatatctcaaaaaa
ttagtttccagaattaatacaagattgattgttgcaatctacctagatgattgatataca
atttttaacttgagcaaaatagcatacatttatagatacaatttctccatttttcctgac
gagctttcagtacaattcaatagttttttagaaaaaaataagttaaaggaatatatgtct
tcagtaaatgaattaaattcagatggaaaaaaggtacaaattgtggttgttgcaggaact
cacaacacactttacagttacttgagaaaaattctggaaggagtagaacctagattgaag
cttatcccaaaggatgtgataatttttatgacaaatacatttatcgaaaaggaattagag
gaaatttctacaattaatgagcttgctagaaatggaggagaagtgttaaaagcgccctct
tctttagttccatatatggctggagctgaggatattatgctacttgtgaattgcctctct
ccatacaatgtagttccagtgaatggtttttacaaagattatgtagaattcaacaaatca
ttgtcaaatgtaatgaatcctagaaagattcactttttagaaaatgggaattatattact
ttagatagaaaaaatgtaacagtaattgaaaatgaaatttctgaagtttatgtttccggt
caggagatgttagatataaatagaaatactttatttgagagaaaattattagctcaaagt
ggagtaataattattgcgattagatgcaataataaaaagaatgtaattagtaaacctata
gtcaagatgatgagcgtgtttgcaaaagattttcaaaaacaagatgaagcactaactcag
gtaaaaaattatctgagacaggatttatctaagtatcttcaattcaattcagaaattgat
aatagatctttgaagcaaacaattagaaaatctgtatatcatgcgttagatcctttctta
tttagaaaaccatcaatattagctgtgatctctcatttacattaa
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