Marinobacter nauticus ATCC 49840: MARHY0012
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Entry
MARHY0012 CDS
T02083
Symbol
recC
Name
(GenBank) exonuclease V, gamma chain with recB and recD: 5' and 3' nuclease, ATPase, recombinase, helicase
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MARHY0012 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhc03400
]
MARHY0012 (recC)
Enzymes [BR:
mhc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MARHY0012 (recC)
DNA repair and recombination proteins [BR:
mhc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MARHY0012 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CCG93516
LinkDB
All DBs
Position
complement(20002..23586)
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AA seq
1194 aa
AA seq
DB search
MAAIEPGFHAIHANHLEDLRRAVVYICRQNPMPPLQSETFLVQSNGIAQWLKLALAEKRT
EDGVEGGLGIAAGMDFLFPARFIWQAYRAVLPDGEVPEQSPFDKRRLVWRLYRLLPELVG
QDEAFTPLARFLDGRDTDLRNFQLAEKVADLFDQYQVFRADWLAAWEQGKDVVITARGEE
KALDAEACWQPLLWRKLVADTGSEAHTSRSQIHTRFMEQGQRISEPANPARLPRRIVVFG
VSSLPRQALEALYVLSRFSQVVLCVHNPCQFYWADIISDRELLKAERKRGAAHPVLSQID
DPDQLHQHANPLLAAWGKQGRDYIRLLDEFDNPDDYRASFQTPGQKIDIFTDHGDVDTPC
LLHQLQNDIHNLTPLQEIRQQQRTVDLTRDHSVVFHDAHGPQREVEILHDQLLAAFNADP
TLRPRDVIVMVPDINVYAPHIQAVFGRYSPGRKRHIPFTISDQGQRHHEPVLIALETLMS
LPRSRFGVSEIISLLEVAGIRDRFDISEDDIPLARRWVEGANIRWGLHGKHRESLDLPAE
LERNTWQAGLRAMLLGYGMGDDQPWGGVEPYGEIGGLQASLAGRLGEFVHQLEALWQALQ
ATRTPGEWEALFSAMLEQFFHKVEGQDLLLLNRFRRQLEQWLDDALAAGLEQQPLPLNIV
KDVLLQGLDEGGLNQRFLAGKVNFATLMPMRAIPFRKVCLLGMNDGDYPRSRPPVDFDLM
AQDYRPGDRSRREDDRYLFLEALLSAREQLYISWVGRSIRDDSERPPSVLIGQLQDHLNS
LWTVAGQPDGSVTKALTTQHPLQPFSRDYFPRTNGVGDGEETQPKPLADVLQARGLFTYE
REWRSAHAVDNPEQSREALPYQTPEEPISLTELANFLKKPIDTFYQRRLQVRFEAVEEDD
TDNENFDLNGLDRWRLDNELIQEGVVKAASEEELHERLEATLDRMARRGDLGMGVTEHRL
RTELAGRLPDLFQRYRGALTEWPEAVAEPLPFECRYSDSTGAVEVVDLIDNLRCNPSGQL
CRLVIANAGLLTGSGYSKKVRYANLLRDWLIHLAGQLSGQPFETVILGKEEGRKFHFPVM
APEQAQKHFEAILGRWMEATTRTLPIHCEAGFAWITSFYGGKKFIGDHERAISEAEQAYS
TALDRDTGYLLGAFESPEALMASGEFEALLHQLYVPLWEAEQGKSAAEQIGSME
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggccgccattgaacccggctttcacgccatccacgccaaccacctggaagacctgcgc
cgtgccgtggtctatatctgccggcagaaccccatgccgccgctgcagagcgagaccttt
ctggtgcagagtaacggcattgcccagtggctgaagctggcgctggcggagaagcgcacc
gaggatggcgtggaaggcggcctgggcattgccgccggcatggatttcctgtttcctgcc
cggttcatctggcaggcctatcgggcggtgttgcccgacggcgaagtaccggagcagtcc
cccttcgacaagcgccgcctggtctggcggctgtaccgattgctgccggagctggtgggg
caggatgaggcgtttacgccactggcccgattcctggacggccgcgataccgacctgcgc
aactttcagctggccgagaaagtggccgacctgttcgaccagtaccaggtgttccgggcc
gactggctggcggcctgggagcagggcaaggatgtggtaatcaccgctcggggcgaggag
aaagccctggatgcggaagcctgctggcagccgctgctctggcgcaagctggtagcagat
acaggcagcgaggcccacaccagccgctcgcagattcacacccgctttatggaacagggc
cagcgcatcagcgaaccggctaacccagcccgcctgcccagacgcatcgtggtgttcggg
gtctcgtctttaccccggcaggcgctggaagccctgtatgtcctgagccggttcagccag
gtggtactgtgtgttcacaacccctgccagttctactgggccgacatcatcagcgaccgg
gaactgttaaaagccgaacgcaagcggggcgcagcacacccggtgttgtcgcaaattgac
gacccggaccagttgcaccagcacgccaacccgttgctggcggcctggggaaaacagggc
cgggactacattcgcctgctggatgagttcgacaacccggacgactaccgcgccagtttc
cagacgccgggccagaagatcgacatcttcaccgaccatggcgatgtggataccccctgc
ctgctgcaccagttgcagaacgatatccacaacctgacgccgctgcaggaaatccgccag
cagcagcgcacggtggatctgacccgcgaccattccgtggtgttccacgacgcccacggc
ccccagcgggaagtggagattctgcacgaccagctgctggctgcgttcaatgccgatccg
acgctgcggccccgggatgtaattgtgatggtgcctgacatcaacgtgtacgcgcctcat
attcaggcggtgttcggtcgctactcgccgggccgcaagcgccacattccgttcaccatt
tccgaccagggacagcgccaccacgaacccgtgctgattgccctggaaaccctgatgtca
ttgccccgaagccgcttcggtgtgagcgaaatcatcagcttgctggaagtagccggcatc
cgcgaccgctttgacatcagcgaagacgacatccctctggcccggcgctgggtggaaggc
gccaatattcgctggggcctgcatggcaagcaccgggaaagcctggacctgccggcagag
ctggaacgcaacacctggcaagccgggctgcgcgccatgttgctgggttatggcatgggc
gatgaccagccctggggcggggtagagccctatggtgaaatcggcggcctgcaagccagc
ctggccggtcgcctgggcgaattcgtgcaccagctggaagccctgtggcaggcactgcag
gccacccgcacgccgggggaatgggaagccctgttctccgccatgctggagcagtttttc
cacaaggtggaaggccaggacctgctgttgctgaaccgcttccgccgtcagttggagcag
tggctggacgatgccctggccgccggactggaacagcaaccgctgcccttgaatatcgtc
aaggatgtgctgctgcagggcctggatgagggcggcctgaaccagcgtttcctcgccggc
aaggtcaacttcgccaccctgatgccgatgcgggccattccgttccgcaaggtatgcctg
ctgggcatgaacgacggcgactaccctcgctcccggccgccggtggatttcgacctgatg
gcccaggattaccggccgggggaccgctcccgccgggaagacgaccgctacctgtttctg
gaagccttgttgtccgcccgggaacagctgtacatcagttgggtggggcgcagtatcagg
gacgactctgaacggccaccctcggtgctcatcggccagttacaggaccacctgaacagt
ctgtggacagtagcggggcaaccggatggttctgttaccaaggctctgaccacccagcat
ccgctgcagcctttcagccgggactatttccccagaaccaacggcgtgggcgacggtgaa
gagacccaacccaaacccctggccgatgtgctgcaggcccggggactgttcacctatgaa
cgggaatggcgcagcgctcatgccgtggataacccggagcagagccgggaagcgctgccg
taccagacgcccgaagagcccatcagcctgacggagctggcgaatttcctgaaaaagccc
atcgacaccttctaccagcgccggctacaggtgcgctttgaagcggtggaagaagacgac
accgataacgaaaacttcgacctgaacggcctggaccgctggcgcctggacaacgagctg
atccaggagggtgtcgtcaaagccgccagtgaagaggagttgcacgaacgcctggaagcc
actctggaccgtatggcccggcggggcgacttgggtatgggggtgaccgaacatcgcctg
cgcaccgagctggccggccgcctgccagacctgtttcaacgctatcgcggcgcgctgacc
gagtggccggaagcagtggccgagcccttaccgttcgagtgtcggtactcggatagcaca
ggcgccgtggaggtggtcgatttaatcgacaatctgcgctgcaacccttcaggacaactg
tgccgactggtgatcgccaacgccggtctgctgaccggctccggttactcgaaaaaagtc
cgctacgccaacctcctgcgggactggttgattcacctggccgggcaactcagtggccag
ccctttgaaaccgtgatcctgggcaaggaagaaggccgtaaattccacttcccggtcatg
gccccggagcaggcacaaaagcacttcgaagccattctgggccgctggatggaagccacc
acccggaccctgcccattcactgcgaagccggctttgcctggatcaccagtttctatggc
ggcaagaaatttatcggcgaccacgaacgggccatcagtgaagcagaacaggcctattcc
accgccctggaccgggacaccggctacctgctgggtgccttcgaaagtcccgaggcactg
atggcgagcggcgagtttgaagccctgctgcatcagctttatgtgcctctgtgggaagcc
gaacagggcaagtcggcggcggagcaaatcgggagcatggaatga
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