Marinobacter nauticus ATCC 49840: MARHY0406
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Entry
MARHY0406 CDS
T02083
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase, L-lysine biosynthesis
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc00300
Lysine biosynthesis
mhc00470
D-Amino acid metabolism
mhc01100
Metabolic pathways
mhc01110
Biosynthesis of secondary metabolites
mhc01120
Microbial metabolism in diverse environments
mhc01230
Biosynthesis of amino acids
Module
mhc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MARHY0406 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MARHY0406 (lysA)
Enzymes [BR:
mhc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
MARHY0406 (lysA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CCG93907
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Position
447409..448659
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AA seq
416 aa
AA seq
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MDHFNYRNGELYAEDVAVADIAERFGTPAYIYSRATLERHYRAYDEALKNRPHLVCYAVK
ANSNLAVLNVLARLGAGFDIVSAGELERVLRAGGDAGKVVFSGVGKQEWEMKRALEAGVR
CFNVESDTELDRLNKVAGELGVKAPISLRVNPDVDAGTHPYISTGLKENKFGIDIAEAPA
VYARAASLPNLDIHGVDCHIGSQLTSVSPFLDALGRVLSLIDTLAEQGIRIRHLDMGGGL
GVTYNQETPPQPADYVKALNERLGDRELELVLEPGRSIAANAGILVTRVEFLKCTEHRNF
AIIDAAMNDLIRPALYSAWQAIIPVQPHQDSEERPWDLVGPVCETGDFLGKDRALRLKAG
DLLAVRSAGAYGFVMASNYNTRNRPPELMVDGDQVHVVRRRETLDDQLAPESCLPE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatcacttcaattaccgtaacggcgaactctacgccgaagacgttgccgttgccgat
atcgccgagcgctttggtacgccagcctacatctattcccgggcgacgttggagcgccat
taccgtgcttacgatgaggccctgaagaatcgccctcatctggtgtgttatgcggtcaag
gcaaacagcaatctggccgtgctcaatgtgctggctcgtctgggggccggttttgacata
gtctcggccggagagcttgaacgtgtgcttcgtgccggcggggatgccggtaaagtggtt
ttttccggcgttggcaagcaggaatgggaaatgaagcgggccctggaggccggcgttcgc
tgtttcaatgtcgaatccgacaccgagcttgatcgcctgaacaaggtggctggcgaactg
ggagtgaaagcgcccatttccctgcgagtgaatccggacgtggatgcgggcactcatcct
tatatctcgaccggcctgaaggaaaacaagttcggcatcgatatcgccgaggcgccggca
gtctatgcccgggcggccagcctgcccaacctggatatccacggggtggactgccacatc
ggctcacagctgacgtcggtttcgccgttcctggatgccctgggccgggtgctttccctg
atcgacactctggcagagcagggtatccgtatccgccatctggatatggggggcggtctg
ggtgtgacctacaatcaggaaaccccgccgcaaccggcagattatgtgaaagcccttaat
gaacgcctgggtgatcgggagctggagctggtgctcgagccgggccgctccattgccgcg
aatgcgggcattctggtgacccgggtggaattcctgaagtgcaccgaacaccggaatttc
gccatcatcgatgcggccatgaatgatctgatccggccggcactctacagtgcctggcag
gccattattccggttcagccccatcaggacagtgaggaaaggccctgggacctggtgggc
ccggtgtgcgaaaccggcgattttctcggcaaggatcgcgctctgcgcctgaaagccggc
gatttgctggcggtgcgctcggccggggcctacggatttgttatggcctccaactacaac
acccgcaaccggcccccggagttgatggtggacggagatcaggtgcatgtggttcggcgc
cgggagactctggacgaccagctggcgccggaaagttgcctgccggaatga
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