Marinobacter nauticus ATCC 49840: MARHY0407
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Entry
MARHY0407 CDS
T02083
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc00300
Lysine biosynthesis
mhc00470
D-Amino acid metabolism
mhc01100
Metabolic pathways
mhc01110
Biosynthesis of secondary metabolites
mhc01120
Microbial metabolism in diverse environments
mhc01230
Biosynthesis of amino acids
Module
mhc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MARHY0407 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MARHY0407 (dapF)
Enzymes [BR:
mhc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MARHY0407 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
DUF5825
Draxin
Motif
Other DBs
NCBI-ProteinID:
CCG93908
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Position
448749..449600
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AA seq
283 aa
AA seq
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MVDAISQPFRLAPDTIRELADRNFGIGFDQLLVVEPPGLPDVDFRYRIFNADGSEVEQCG
NGARCFARFVRDQRLTNKRVIRVQTAKGVIELKVGRDGLVAVNMGVPELNPPAIPFAADQ
RKDVYTVDVNGQTVELSAISMGNPHGVLVVDNVDTAPVESLGPQLEKHPRFPARANIGFL
QVIDRRHARLRVFERGSGETLACGSGACAAVVAGCLRGLLDSRVEVELRGGRLVIEWQGE
GTPVMMEGPATTVFEGQLRLPGEPQPRRRRSARPNTRPHKNGA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgacgccatcagccagccattccggctggccccggacacgatccgggagctggcg
gatcgcaatttcgggatcggttttgatcagctgctggtggtggagccgccggggctgccg
gatgttgattttcgctaccgtattttcaatgccgatggctcggaggtggaacagtgcggc
aacggcgcccgctgcttcgcccgctttgtgcgcgatcagcgcctgaccaacaagcgtgtt
atccgggtccagactgccaagggtgtgattgagctcaaagtgggtcgggatggcctggta
gcggtcaacatgggggtgccggagctcaacccccccgcgatcccctttgcagcggatcag
cgcaaggatgtgtataccgtcgacgtgaatggtcagacggtcgagctgtcagccatctcc
atgggtaatccccacggagtgctggtggtggacaatgtcgatacggcgccggtggaaagc
cttggcccgcagttggaaaagcatccccggtttccggccagggccaacattggttttctg
caggtgattgatcgccgccatgcccggttgcgggtgtttgaacggggctccggcgaaaca
ctcgcctgcggcagcggtgcctgtgcagcggtggtggctggttgtctccgcggcttgctg
gacagccgggtcgaagtcgagttgcgtggcggcaggctggtcattgaatggcagggggaa
ggtacccctgttatgatggaaggtcctgcaaccacggtatttgaaggccagttgcggctg
cctggcgaaccccagccccggcgccgcaggagtgcccgcccgaacacccgacctcataaa
aacggggcctga
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