Marinobacter nauticus ATCC 49840: MARHY0468
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Entry
MARHY0468 CDS
T02083
Symbol
rpoZ
Name
(GenBank) RNA polymerase, omega subunit,chaperone-like function in RNAP assembly and stabilization
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MARHY0468 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhc03021
]
MARHY0468 (rpoZ)
03400 DNA repair and recombination proteins [BR:
mhc03400
]
MARHY0468 (rpoZ)
Enzymes [BR:
mhc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MARHY0468 (rpoZ)
Transcription machinery [BR:
mhc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MARHY0468 (rpoZ)
DNA repair and recombination proteins [BR:
mhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MARHY0468 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
CCG93967
LinkDB
All DBs
Position
509686..509898
Genome browser
AA seq
70 aa
AA seq
DB search
MARVTVEDCLENVDNRFQLVMLATKRARQIATKGAEPMVAEENDKPTVIALREIAEGKVT
RDLLLEEDDD
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggcacgagttaccgttgaagattgtctggaaaacgtagataaccgattccagctggtc
atgctggccaccaaacgcgcccgccagatcgccaccaagggtgccgagccgatggttgcg
gaagagaatgataagccgaccgttattgccctgcgtgagattgcagaaggcaaggtgacc
cgcgatcttctgctggaagaagacgacgactga
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