Marinobacter nauticus ATCC 49840: MARHY1530
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Entry
MARHY1530 CDS
T02083
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARHY1530 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhc03019
]
MARHY1530 (rhlB)
Enzymes [BR:
mhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MARHY1530 (rhlB)
Messenger RNA biogenesis [BR:
mhc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MARHY1530 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrA_inter
AAA_30
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
CCG95007
LinkDB
All DBs
Position
1592700..1593971
Genome browser
AA seq
423 aa
AA seq
DB search
MTSEPKHTGDLRFSDLNLDKRLLDAISKIGFEYCTPIQAETLPWTLACEDLIGQAQTGTG
KTAAFLITAIQSLLETPIDEKERFASEPRVLALAPTRELAMQIAKDAEQLCHYTGHNVVT
VVGGMNYDKQREQLQNEIVDILVATPGRLIDFLGSQDVFLDQLDILILDEADRMLDMGFI
PDVKRIIRKCTPKDERQTLLFSATFNQDVLNLASMWTRNAEFVEIEPEQKTAERVEQTVF
LVSDNEKLPVLVNYLKRPEVEKAIVFANRRDQCRDLEEDLKNQGVKVALMSGEIAQNKRL
KTLDQFKKGQIQVLVATDVAGRGIHVNGVTHVFNYNLPDNAEDYVHRIGRTGRAGKTGVS
VSFAGEEDAFALPEIEKYISQKLKTAVPDENLTAAMDNPPITRKRGGRRPQGNSGRGPRP
RRH
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacatcagaaccaaagcataccggcgatttacgcttcagcgacctcaatctggacaag
cgactgctggatgccatttccaaaattggcttcgagtactgcacgcccattcaggcagaa
acactgccctggaccctggcctgtgaagacctcattggccaggctcagacgggcaccggc
aagactgcagcctttctgattaccgcgattcagtctttgctggaaactccgatcgacgag
aaagagcgttttgcctccgagccccgtgttctggcgttggcgcccacccgcgaactggcc
atgcagattgccaaggacgccgaacagctgtgtcattacactggccacaatgtggttact
gtggttggcgggatgaactacgacaagcagcgggagcagttgcagaacgaaattgtcgac
atcctggtggctaccccgggccgattgatcgatttcctgggctcacaggatgtttttctg
gatcagctcgacatcctcattctggatgaggcggatcgaatgctcgatatgggctttatc
ccggacgtcaagcgcatcatccgcaagtgtacccccaaggatgagcgtcagaccctgctg
ttcagtgccaccttcaaccaggatgtcctcaacctggcatccatgtggacccgcaatgcc
gagtttgtcgaaatcgagccggaacagaagactgcagaacgagttgaacagactgttttc
ctggtgtccgataacgaaaagctgccggtactggtgaattacctgaagcggccggaagta
gagaaagcgattgtttttgccaaccgtcgtgaccagtgccgtgatcttgaagaggacctt
aaaaaccagggtgtgaaagtggcgttgatgtctggcgagatcgcccagaacaagcggctg
aaaacgctagaccagttcaagaaggggcagatccaggtgctggttgctaccgatgtggcg
ggccgtggcatccacgtaaacggcgtgacccatgtattcaactacaatttgccagacaat
gccgaagattacgttcaccgcattggtcgtactggccgtgccggtaaaaccggcgtatcg
gtgagcttcgctggtgaagaggacgcgtttgccctgccggagattgaaaaatacatcagc
cagaagctgaagacggcggtgccagatgagaatctgacagccgccatggataacccgccg
attacccgcaagcggggtggtcgccggccgcagggcaacagcggtcgcgggcccagacca
cgtcgtcattga
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