Marinobacter nauticus ATCC 49840: MARHY1833
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Entry
MARHY1833 CDS
T02083
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MARHY1833 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhc03019
]
MARHY1833 (recQ)
03400 DNA repair and recombination proteins [BR:
mhc03400
]
MARHY1833 (recQ)
Enzymes [BR:
mhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MARHY1833 (recQ)
Messenger RNA biogenesis [BR:
mhc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MARHY1833 (recQ)
DNA repair and recombination proteins [BR:
mhc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MARHY1833 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
CCG95310
LinkDB
All DBs
Position
complement(1904221..1906098)
Genome browser
AA seq
625 aa
AA seq
DB search
MYMDQDFDQLATEPPTAAGRNPEQVLHEVFGYESFRPLQGDIVREVVNGGDALVLMPTGG
GKSLCYQVPALVRPGTAIVISPLIALMQDQVAALRELGVKAAFLNSTMDFEQARATEYAL
ATGKLDLLYCAPERLIQPRTIELLHNASLSLFAIDEAHCVSQWGHDFRSDYLQLSMLAQE
FPGIPRIALTATADERTRKEIAERLSLTTARHFISGFDRPNIQYRITPKTNANKQLLGFI
KAEHEGDCGIVYCLSRNKVDATARLLSSKGYTALPYHAGLSAEDRARNQERFLREDGVIV
VATIAFGMGIDKPDVRFVAHVDLPKSLEAYYQETGRAGRDGKPSTAWMVYGLQDVIKLRQ
MLEASQGNDQFKRVERQKLDAMLGLCEVTQCRRQVLLHYFGDNLEAPCGNCDTCLNPPET
WDGTVAVQKALSCVYRTGQRFGVNYVIDVLRGSENERILQSGHQAITTYGIGQELSANEW
KSVFRQLVANGYLRADPEGYGALQLTERCRPLLKGAQAIELRKDPVVRNTAGGKSSTSRR
SGQNVRDQITDHAGWDALRACRKELADKQGVPPYVIFHDTTLFDMLERRPSTLEELAEVS
GVGAAKLEKYGDVFLQALRSINSEA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtacatggaccaggacttcgaccaactcgccactgaaccacccaccgctgcgggccga
aatccggagcaggttctgcacgaggtatttggttacgagagttttcggcccctgcagggg
gatattgtccgggaagtggtcaacggtggtgatgcccttgtgttgatgcccaccgggggt
ggtaaatccctgtgttatcaggtccccgctctggttcggcccggcaccgctattgttatc
tcaccgctgatcgcgcttatgcaggatcaggtggcggcgttgcgggagcttggagtgaaa
gcggcgttcctgaattccaccatggatttcgaacaggcccgtgccaccgaatacgccctg
gcgaccggcaagctggacctgctctattgcgcgccggagcggctgattcagccgcgaacc
attgagctgctgcataacgcgtccctgtcgttgtttgccatagacgaggctcactgcgtc
tcccagtgggggcacgatttccggtccgactaccttcaactgagcatgctggcccaggaa
tttcccggcatcccccgtatcgcactgacagcgaccgctgatgagcgcacgcgaaaagag
attgcggaacggctgtcgctgaccaccgcccggcatttcatcagtggctttgatcgcccc
aatattcagtatcggattacgccaaagaccaacgcaaacaagcagttgttgggctttatt
aaagcagagcatgaaggtgattgcggtattgtctattgcttgtcccgaaacaaggtcgat
gccacagcccgattactgagcagcaagggctataccgcactgccctaccatgccgggctg
agcgccgaagaccgcgcccgcaatcaggagcgctttctcagggaagatggcgttattgtg
gtggcaaccattgcctttggcatgggcatcgataaacctgatgtgcgttttgtcgcccac
gtggacctccccaaaagcctggaagcctattaccaggaaacgggccgggcgggccgggat
ggcaaaccgtccaccgcgtggatggtctatggcctgcaggatgtcatcaaactccggcag
atgctggaggcctctcagggtaacgatcagttcaagcgggttgagcgacagaagctggat
gccatgcttgggctgtgcgaagtgacccagtgccggcgacaagtgttgttgcactatttt
ggagacaacctggaggctccctgcggaaactgcgatacctgcctgaaccctccggaaacc
tgggatggcacggtggcggtgcagaaggccctctcctgcgtctaccgcaccggccagcgc
tttggcgttaactatgtcattgatgtacttcgcgggtcagagaatgaacgaatcctgcaa
tccggccaccaggcgatcaccacctatggcatcggtcaggaactgtcagcgaacgaatgg
aagtcggtattccggcaactggtggcgaacggatacctgcgggcagaccctgagggctat
ggcgcgcttcagctaaccgagcgctgccgccccctgctcaagggcgcacaggcgattgaa
ctccggaaagacccggtggtccgcaacaccgctggtggtaagtcatcaacgagccgccgg
agcggccagaacgtgcgggaccagattaccgaccacgccgggtgggatgcgttgcgggcc
tgccgcaaagagctggcggacaagcagggcgtgccgccctacgtgatcttccacgacaca
accctgttcgacatgcttgaacgccgcccttccaccctggaggagctggccgaggtcagc
ggcgtgggcgccgccaagctggaaaagtatggcgatgttttcctgcaggcgctacgctct
atcaattctgaggcttga
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