Marinobacter nauticus ATCC 49840: MARHY2122
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Entry
MARHY2122 CDS
T02083
Symbol
lpd
Name
(GenBank) lipoamide dehydrogenase, E3 component of 2-oxoglutarate dehydrogenase complex Dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc00010
Glycolysis / Gluconeogenesis
mhc00020
Citrate cycle (TCA cycle)
mhc00260
Glycine, serine and threonine metabolism
mhc00280
Valine, leucine and isoleucine degradation
mhc00310
Lysine degradation
mhc00380
Tryptophan metabolism
mhc00620
Pyruvate metabolism
mhc00630
Glyoxylate and dicarboxylate metabolism
mhc00640
Propanoate metabolism
mhc00670
One carbon pool by folate
mhc00785
Lipoic acid metabolism
mhc01100
Metabolic pathways
mhc01110
Biosynthesis of secondary metabolites
mhc01120
Microbial metabolism in diverse environments
mhc01200
Carbon metabolism
mhc01210
2-Oxocarboxylic acid metabolism
mhc01240
Biosynthesis of cofactors
Module
mhc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mhc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mhc_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
mhc_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
MARHY2122 (lpd)
00020 Citrate cycle (TCA cycle)
MARHY2122 (lpd)
00620 Pyruvate metabolism
MARHY2122 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
MARHY2122 (lpd)
00640 Propanoate metabolism
MARHY2122 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MARHY2122 (lpd)
00280 Valine, leucine and isoleucine degradation
MARHY2122 (lpd)
00310 Lysine degradation
MARHY2122 (lpd)
00380 Tryptophan metabolism
MARHY2122 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
MARHY2122 (lpd)
00670 One carbon pool by folate
MARHY2122 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mhc04147
]
MARHY2122 (lpd)
Enzymes [BR:
mhc01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
MARHY2122 (lpd)
Exosome [BR:
mhc04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
MARHY2122 (lpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
GIDA
FAD_binding_2
DAO
FAD_oxidored
FAD_binding_3
HI0933_like
3HCDH_N
Lys_Orn_oxgnase
AlaDh_PNT_C
NAD_binding_8
Thi4
UDPG_MGDP_dh_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
CCG95597
LinkDB
All DBs
Position
complement(2163819..2165261)
Genome browser
AA seq
480 aa
AA seq
DB search
MSDKFDVIVIGAGPGGYVAAIKAAQLGLKTACVESWTGKDGKSQVLGGTCLNVGCIPSKA
LLEVTHKFEEASHDYDSMGILAKDVKIDVAKMMERKAGIVKQLTGGIAGLFKANGVTSIH
GHGKLLAGRKVEVTDKDGKTKTYEADNVIIATGSRPIEIPPAPFDGEYIVDSEGALEFTE
VPKRLGVIGAGVIGLELGSVWARLGSEVTVIEAQDSFLPAVDQQCAKDALKQFQKQGLNI
VMGARMTGAEVKRKLVNVSYEDSKGKQDAKFDKLIVAVGRRPYTDGALAEDSGVTMDERG
FIFVDDNCKTEAPGVWAIGDVVRGPMLAHKASEEGVMVAERIAGHKPQVNYDCIPNVIYT
FPEVAWVGKTEEQLKAEGEEYNVGTFPFAANGRAMAANAASGMVKIIADAKTDRILGFHV
VGPQASEIVAQGVIAMEFGSSAEDLALTCFAHPTLSESVHEAALAVAGGAIHVANRRKKK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataagttcgacgttattgtcattggtgcaggccccggtggttacgttgctgcc
attaaagccgctcagttgggtcttaagaccgcctgtgttgagtcctggactggtaaagac
ggcaagagccaggtgctcggtggcacctgtctgaacgtaggctgtatcccgtccaaggcc
ctgctggaagtgactcacaagtttgaagaagccagccacgattacgattccatgggcatc
ctggccaaggacgtgaaaatcgacgttgccaagatgatggagcgcaaggctggtatcgtt
aagcagctgaccggtggcattgctggcctgttcaaggccaatggcgtcacctcgatccac
ggccacggcaagctgttggccggtcgtaaggtggaagtcaccgacaaggatggcaaaacc
aagacctacgaagccgacaacgtgatcatcgccaccggttcccggccgatcgagattccg
ccggcgccgttcgacggtgagtacatcgtcgattccgagggtgcgctggagtttaccgaa
gttcccaagcgtcttggtgtgatcggtgccggtgttattggtctggagctgggtagcgtc
tgggcccgactgggttcagaagtaaccgtgatcgaagcgcaggacagtttcctgccggcg
gttgaccagcagtgtgccaaggatgcgttgaagcagttccagaagcagggcctgaacatc
gtgatgggcgcccgcatgactggcgcggaagtcaagcgcaagctggttaacgtcagctac
gaagactccaagggtaagcaagacgccaagtttgacaagctgatcgtggctgttggccgt
cgtccgtacaccgatggtgcactggctgaagactccggcgtgaccatggatgagcggggc
tttattttcgtagacgacaactgcaagaccgaagcaccgggtgtctgggccatcggtgat
gtggttcgtggtccaatgctggcccacaaagcgtctgaagagggcgtgatggttgctgag
cgtattgccgggcataagccccaagtcaattacgactgcatcccgaatgtcatctatacc
ttccctgaggttgcctgggtcggcaagaccgaagagcagctgaaagctgaaggcgaagaa
tacaacgtgggaaccttcccgtttgcggcgaatggtcgtgccatggctgccaatgccgct
tccggtatggtcaagatcatcgcagatgcgaagaccgaccgtattcttggcttccacgtg
gtgggtccgcaggcgtctgaaatcgttgcccagggcgtgatcgccatggaattcggttcc
agtgcagaagatctggctctgacctgtttcgcgcacccgactctgtccgagtctgtgcac
gaagcggccctggccgttgctggcggtgcgattcacgtcgccaaccgtcgcaagaagaag
taa
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