Marinobacter nauticus ATCC 49840: MARHY2372
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Entry
MARHY2372 CDS
T02083
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc03030
DNA replication
mhc03430
Mismatch repair
mhc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MARHY2372 (dnaE)
03430 Mismatch repair
MARHY2372 (dnaE)
03440 Homologous recombination
MARHY2372 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhc03032
]
MARHY2372 (dnaE)
03400 DNA repair and recombination proteins [BR:
mhc03400
]
MARHY2372 (dnaE)
Enzymes [BR:
mhc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MARHY2372 (dnaE)
DNA replication proteins [BR:
mhc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MARHY2372 (dnaE)
DNA repair and recombination proteins [BR:
mhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MARHY2372 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
CCG95845
LinkDB
All DBs
Position
complement(2413490..2416978)
Genome browser
AA seq
1162 aa
AA seq
DB search
MTMANTFVHLRVHSEYSMVDGLVRVKPLISRVAELGMPAVGLTEQSNMCSLVRFYKAAMG
AGVKPIIGADIWLENPDEPETPFRLTLLARDNDGYLNLTEIISQGYTEGQRYGKPIVQKT
WLESRAKGLIVLSGAKMGDVGKALLAGKPELARERADYWRNLYPDSYYLELQRTGRAGDE
DCLHMSVELAAELGLPVVATNDVHFLEADDFEAHEARVCIGESRTLDDPRRDRRFSDQQY
LRSAEEMIELFSDIPEAVENTVEIARRCSVKVRMGEYFLPNYPIPDGMTMDEYFRHVSEE
GLEARLAKTLSKDDPEYDQKREEYYKRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNGVP
VGPGRGSGAGSLVAYALLITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIDY
TAQKYGREAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKLIPFEVGMTLNKAIEQ
EPQLKEFLEQDEEAQEIWEMALKLEGVCRNAGKHAGGVVIAPTKITDFSPLYCDDEGGSL
VTQFDKGDVEDAGLVKFDFLGLRTLTIIKWALNMINPRRQQRGEGELDISAIPLDDKPSF
DMLKKAETTAVFQLESRGMKDLIRRLQPDSLEDMIALVALFRPGPLQSGMVDDFIDRKHG
RQPLSYPHPDYQYQGLKPVLEPTYGVILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKP
EEMAKQKAIFLDGCENNGIDKTLAENIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAH
YPAEFMAAVLTADMQNTDKVVTLVEECRNMKLDLLVPDVSRSAYTFTVNDQGQIVYGLGA
IKGLGEGPIESIVEAAKAGPFQDIFDFCRRVDLKKVNKRAMEALIRSGAMDKLGADRAKL
MASIDKAIQQADQQSRNDAAGMVDMFGEMLEGGGDDEDTYADVAHVREWPEKERLKGEKD
TLGLYLTGHPFDEYEREVRRFVRCSIADLKPNKSPQRVAGLVVAQRTMKTKTGSTMCFIT
LDDRSARIEATLFSEAFFENRELLQSDQVIVVEGQVSHDDYSGQMKMRVSSVMDVATARQ
QFSRGIKLALRSEQLQNGLLDKLDDTLRPFRSEGSPVWIEYRSAEASTRIELGESWRVQP
DDTLLFELKHLVGDQSVELVYD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggcaaacacctttgtacacctgcgcgttcactccgaatactccatggtggat
ggcctggttcgggtcaaaccgttgatcagccgggtcgcggaactgggcatgccggcggtt
ggcctgaccgaacagtccaacatgtgctcactggtacgtttctacaaggccgccatgggc
gcgggcgtcaagcccattatcggtgccgatatctggctggagaatccggatgagcccgaa
accccgttccggctgaccttgctggcccgagacaacgatggttacctgaacctgacggag
atcatttcccagggctataccgaaggccagcgctacggcaagccgattgtccagaaaacc
tggctggaatcccgtgccaagggcctgattgtgctgtccggcgccaagatgggggacgtc
ggcaaggccttgctggccgggaagccggaactggccagggagcgtgcagactactggcga
aacctctatcccgacagttattacctggagctgcagcgcacagggcgggccggtgacgag
gattgtctgcacatgagtgtggagttggcggctgaactcggtttgccggtggtggcgacc
aatgacgttcacttccttgaggcggatgattttgaagcccacgaagcccgggtctgcatc
ggagaaagccggactctggacgatcccaggcgggatcgtcggttcagcgaccagcaatat
cttcgcagcgccgaggaaatgatcgagctgttctcggacattccggaagccgtggaaaac
accgtggaaatcgccaggcgctgttcggtgaaggtccggatgggcgaatactttctgcct
aattaccccattccggacggtatgaccatggacgaatattttcgccatgtgtcggaagaa
ggactggaagcccggctggcgaagaccctgagcaaggacgatccggagtatgatcaaaag
cgtgaagagtattacaagcgcctgaagtttgagctggatatcattatccagatggggttc
cccggctacttcctgatcgtaatggacttcatcaagtgggccaagaacaacggcgttccg
gtagggccgggccggggttccggtgccggctcgctggtggcgtatgcgctgctgatcacg
gacctggatccattggaatacgacctgctgttcgagcggttcctgaacccggagcgggtc
tccatgcctgacttcgacgtcgacttctgcatggaaggccgggaccgcgtcatcgactac
accgcccagaaatacggccgggaagcggtatcccagattattaccttcggtaccatggcc
gccaaggcggtggtccgtgatgtggcccgggtgcagggaaaatcctacggtctggcagac
aaactctccaaactgatcccctttgaagtgggcatgaccctgaacaaggcgatcgagcag
gagccgcagctcaaggaatttctggagcaggacgaagaagcccaggaaatctgggagatg
gctctgaagctggaaggtgtgtgccgtaacgccggcaagcacgccgggggcgtggtgatc
gcacccaccaagatcaccgatttttcgccgctttactgtgatgacgaaggcggcagtctg
gtgacccagttcgacaagggcgatgtggaagacgccggcctggtgaaatttgactttctg
gggctgcgaaccctgaccatcatcaaatgggcactgaacatgatcaacccgcgccggcag
cagcgtggggaaggcgagctcgacatcagcgcgattccgctggacgacaagccctctttt
gacatgctcaagaaagcagagaccacggcggtattccagttggaatcccggggtatgaaa
gaccttatccgccgcctgcaaccggactccctggaagacatgatcgccctggtcgccctg
tttcggcccggtccgctgcagtccggcatggtggacgactttatcgaccggaagcacggt
cggcagccgttgtcttatccgcatcccgattaccagtatcagggcctgaagccggttctg
gagcccacctacggggttatcctgtaccaggagcaggtcatgcagatcgctcaggtgatg
gcgggctatacccttggcggcgccgacatgctgcgccgggccatgggtaagaaaaagccg
gaagaaatggccaagcagaaagccatcttcctggacggttgtgaaaacaacggcatcgac
aagaccctggcggaaaacatctttgacctggtggagaaattcgccggttacggcttcaac
aaatcccactctgccgcatacgcactggtgtcgtaccagaccctgtggctgaaagcacac
tatccggccgaattcatggctgcggttctcaccgccgatatgcagaacaccgacaaggtg
gtgacgctggtggaagagtgccgcaacatgaagctggacttgctggtgccggacgtcagc
cggtccgcttatacctttaccgttaacgatcagggccagattgtgtacggcctgggcgca
atcaagggcctgggtgaaggtcccatcgagagcattgtagaagcagccaaagcaggcccc
ttccaggatatctttgatttctgccgccgggtggatctgaaaaaggtcaacaagcgggcc
atggaagccctcattcgctctggcgccatggataaactgggtgccgatcgcgccaagctg
atggccagtatcgacaaggccatccagcaggcagaccagcagtcccgcaacgatgccgcc
ggcatggtggacatgttcggagaaatgcttgagggcggtggcgacgatgaagacacctat
gcggacgttgcccacgttcgggagtggccggagaaagagcgcctgaaaggcgaaaaggac
actctgggcctgtaccttaccggccacccctttgatgaatacgaacgggaagtgcgtcgg
tttgtccgttgctcaatcgccgatctgaagcccaacaaatcgccccagcgggtggccggg
ctggtggtggcccagcgcaccatgaagaccaagaccggctctaccatgtgcttcattact
ctggatgatcgcagcgcccggattgaggctaccctgttttccgaggccttcttcgagaac
cgggagttactgcagtcggatcaggtaattgtggtggaaggacaggtcagccatgatgat
tactccggccagatgaaaatgcgggtcagcagcgtgatggatgtggcgaccgcccgtcag
cagttcagccggggtatcaaactggcgttgcgctcagagcagttgcagaatggacttctg
gacaagctggacgataccctcaggccgtttcgcagtgaaggcagcccggtctggattgag
taccgcagtgccgaggccagcacccgtattgaactgggtgaaagctggcgggtacagcca
gacgacacactgttgttcgagctgaagcacctggtgggcgaccagtctgtggaactggtc
tatgattaa
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integrated database retrieval system
