Marinobacter nauticus ATCC 49840: MARHY3165
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Entry
MARHY3165 CDS
T02083
Name
(GenBank) putative DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc03030
DNA replication
mhc03430
Mismatch repair
mhc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MARHY3165
03430 Mismatch repair
MARHY3165
03440 Homologous recombination
MARHY3165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhc03032
]
MARHY3165
03400 DNA repair and recombination proteins [BR:
mhc03400
]
MARHY3165
Enzymes [BR:
mhc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MARHY3165
DNA replication proteins [BR:
mhc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MARHY3165
DNA repair and recombination proteins [BR:
mhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MARHY3165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CCG96622
LinkDB
All DBs
Position
complement(3243917..3245446)
Genome browser
AA seq
509 aa
AA seq
DB search
MSIGLRFSHGGIRRSTLVVMGKMTFKHEMLSEPTFAFVDIETTGGNAQRDRITEIGIRFW
RNGAVVGEWQTLLNPEARISGFIERLTGISNAMVASAPRFETVADELERHLDGCIFVAHN
ARFDYGFIKSEFRRLGRLFSARVLCTVRLSRALYPEAERHNMDALIARHGLPAVERHRAM
GDVTAMLAFFEHTLLEHGEDTVGATINRLLQRPSTPSNVPAEMLADLPAGPGVYRFYGDN
DVLLYVGKSTNIRQRVASHFSGDHQSSRGIRLSESLRRVEYTETAGELGALLLELKQIKT
LSPLYNRRSRAAKSLVSIALHPDNSGYLNAELARTIKPDRLGDYFGLFRSKRDALSALRG
IASKNDLCGKLLGLEPATPGPCFLRSLGRCKGACEGAEDVIRFNLRMQIAFHNLRLKTWP
WPGPVALAEENPENGRTDWLIIWNWIHIETLRSDQYTEADLYDYQPGEDPVTFDLDSYKL
LIKALLGKDRNHHRIIELHAITQPAVLMP
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctataggccttcgattcagtcatggtggcatccggaggagtactttggtcgtaatg
ggcaagatgactttcaaacacgagatgctatctgaacctacgtttgccttcgtcgatatt
gaaaccaccggcggcaatgcccagcgggatcggatcaccgaaattggtatccgcttctgg
cgcaacggggccgttgtgggggaatggcaaacgctcctgaacccggaagcccggatctcc
gggttcatcgaacgactgacgggtatctccaatgccatggtggcgagtgcccctcgtttt
gagaccgttgccgacgagctggagcggcacctggacgggtgcatttttgtcgcccacaac
gcacgctttgattacggttttatcaagagtgaattccgcagattggggcgtctgttcagt
gcccgggtgctttgcaccgttcgactttcccgggcgctctatccggaggccgaacgccac
aacatggatgcgctgatcgcccggcacggattacccgctgttgagcgccaccgggccatg
ggcgatgtcactgccatgctggcgttctttgaacacaccttgcttgagcatggcgaagac
accgttggtgccaccatcaaccgcctgctccagcgccccagcacaccctccaacgtaccc
gcggaaatgctcgctgatttgccggcggggcccggtgtgtaccggttttatggagataac
gatgtgctgctgtacgtgggcaaaagcaccaatattcgccagcgggtggcctcgcatttt
tccggtgatcatcagagcagccgtggaatccgactgtccgaaagcctgcgccgggtggag
tacaccgaaactgccggagagctgggtgccctgttgctggaactcaaacagataaagacc
ctgagcccgctgtataaccgtcgctcacgggcggcgaaaagcctggtcagcatcgccctg
cacccggacaactccggctacctgaatgccgagttggccagaaccatcaagccggaccgg
ctgggagattacttcggcctgtttcgcagcaagcgggacgcgttaagtgcgttacggggc
atcgccagcaaaaacgacttgtgcggaaaactcctgggactggagccggcaaccccggga
ccatgctttctacgatccctggggcggtgcaaaggtgcctgtgaaggcgcggaagacgtc
atccggttcaacctgcgcatgcagattgctttccataatctgcgtctgaaaacctggccc
tggcccggccccgtcgccctggccgaagaaaacccggaaaacggacgcacggactggctg
atcatctggaactggattcatatagaaacgctgcgcagcgaccagtacaccgaggccgat
ctgtacgactatcagcccggggaagacccggtcacctttgatctggattcctacaagctg
ctcattaaagcgctcctggggaaagatcgaaaccaccatcgcatcatcgagttacatgct
ataacacaaccggctgttcttatgccctga
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