Marinobacter nauticus ATCC 49840: MARHY3189
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Entry
MARHY3189 CDS
T02083
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhc03016
]
MARHY3189 (truB)
Enzymes [BR:
mhc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MARHY3189 (truB)
Transfer RNA biogenesis [BR:
mhc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MARHY3189 (truB)
Prokaryotic type
MARHY3189 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
CCG96644
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All DBs
Position
complement(3272410..3273333)
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AA seq
307 aa
AA seq
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MSRRRKGRDVNGILVIDKPQGVTSNGILQQVKRLYGAAKAGHTGALDPLATGVLPLCFGE
ATKFSQTMLDSDKAYITTARLGIRTETGDSEGAVVEEKPVPHFSEEEVEAVLARFRGDIQ
QVPSMYSALKHQGKPLYEYAREGIEIERPARPVTIYELKLLAVREQELDLAVTCTKGTYI
RSLVEDIGEVLGCGAHVSALRRTLASGYTLANAHDVKDLEAMRERGESLDGLLLPPETAL
TMFPEYRLSGVPLVSILNGQPVRIPGQPFEGFVRLYGEHSFVGLAEALPEGDGTQLVPRR
LVKNSKR
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgagccgaagacgcaaaggccgtgacgtaaacggcatcctggtaatcgacaagccccag
ggcgttacctccaacgggattctgcagcaggtcaagcgcctgtatggtgcggcgaaggcc
ggccataccggtgcgcttgatccgctcgccactggcgtgctgcccctgtgttttggtgag
gccaccaagttctcccagaccatgctggacagtgacaaggcgtatatcaccaccgcacgc
ctgggcatccggacagaaaccggagacagcgaaggggctgtggtggaggaaaagccggtt
ccccacttcagtgaggaagaagtggaggccgtactggcccggttccgtggcgacattcag
caagtgccctccatgtactcggctctgaagcatcagggcaaaccactgtacgaatacgcc
cgcgagggtatcgaaattgagcgcccggccaggccggtgaccatttacgagctcaaattg
ttggcggttcgggaacaggagctggatcttgcggttacctgtaccaagggtacgtatatc
cgctcactggttgaggatattggtgaggttctgggctgtggagctcatgtcagtgctctg
cgtcgcaccctggcctccggctacaccctggcaaatgcccacgatgtcaaagacctggaa
gccatgcgcgagcgcggggaaagcctggatggtctgctgttgccgccggaaaccgccctc
accatgtttcccgagtaccgattgtccggcgtgccgctggtatcgatcttgaacggacaa
ccggttagaataccgggtcagccttttgaaggtttcgtccgcctgtatggcgagcattcc
ttcgtagggctggcagaagcattgccggaaggcgatggcactcaactggtgcctcgccgt
ctggtcaagaacagcaaacggtaa
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