Marinobacter nauticus ATCC 49840: MARHY3521
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Entry
MARHY3521 CDS
T02083
Symbol
hepA
Name
(GenBank) RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor)
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
mhc
Marinobacter nauticus ATCC 49840
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhc03021
]
MARHY3521 (hepA)
Transcription machinery [BR:
mhc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
MARHY3521 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
SNF2-rel_dom
Tudor_RapA
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CCG96976
LinkDB
All DBs
Position
complement(3624415..3627276)
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AA seq
953 aa
AA seq
DB search
METSEFVIGQRWVSHSDTALGLGIVTDISGRRVTLGFPAADEERTYAIDNAPLSRIVYQQ
GEEIETFDGERYTVRAVEDLDGVLVYHADDGENIQPISEVKLAGSVNFSAPHQRLFAGQF
DRNGAFRLRVATLQHMDRLRASPAQGLIGARTQHLPHQLYIAHEVARRHAPRVLLADEVG
LGKTIEAGLILHYQLQTGRARRALIVVPDSLIHQWLVEMLRRFNLRFSIIDQARYDDLKA
EEDDVDALVNHIFGDDDAVNPFESDQLVLCSLDFLVRSEKARKDAVAAGWDLMVVDEAHH
LAWSPEQSSPEYDVVEQLSGASQGLLLLTATPEQIGVASHFARLRLLDPARFHNLETFRE
EEQHYEVINQVVRRLQQAPDTISKDDRQALAGWLGDELDELLARDDAHQAVIDALLDRHG
TGRVLFRNTRAAIQGFPERQPLPEPLPCPDLYGHHQYGVTGLAPEQAVDEEDWLAQDPRV
SWLEKKLASLRPAKVVVICAKASTAMALEHYLQLRAGIRSAAFHEHLSLIERDRAAAYFA
DTEQGAQALICSEIGSEGRNFQFAHHLVLFDLPANPDLLEQRIGRLDRIGQTEAIRIHIP
YLQGTSQEVQYRWFQEGLNAFAESCAVGVAVQEHVKDQWQQALDGDESQLEPLLAASASE
TARLKDMLHNGRDALIELNSCRVDEAEALIAGIEEEENAAEVRDYMIQAFDILGVDLEDH
SEHADILKPGEQFQAGLVAELPEDGLTVTWDRQQALQREDMAFMSWEHPMVTGVMDSVNS
SGLGKAALANLSVKALPPGTLLLEAVFAVHCPAPESLQLTRYLPVSPLRLVVDVNGRDLS
KALPHERLNELCSNIRRRTAQAIVPKIRAEVETMVDHAETLAEPHLSPLREQALGRVEDS
FMPEIRRLEALKKVNPAIRNEEIDFLRSQLDAARSAVEHASLALEGIRVIVTS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacatcggaatttgtcatcggccagcgttgggtcagccacagcgatactgccctg
ggtctgggtatcgtaacggacatctcggggcgcagagtcaccctggggttccccgctgcc
gatgaagagcgcacctatgccatcgataatgcgcccttgtcacggatcgtgtatcaacag
ggcgaggaaatagagacctttgacggtgagcgctataccgtgcgcgcagtggaagatctc
gatggcgttctggtgtaccacgccgatgacggtgagaatattcagccgatttccgaggtt
aagctggcgggctctgtgaatttttccgcccctcatcagcgcctcttcgccggccagttt
gatcgcaacggtgccttccggcttcgagtcgccaccctgcagcacatggaccgtctgcgg
gcgtcgccggcccaggggctgattggggcacgcacccagcacctgccacaccagctttat
attgcccacgaagtggcccgccggcatgctccccgggttctgctggccgatgaggttggt
ctgggtaaaaccattgaggcaggtctgattcttcattatcagctgcagaccggtcgagcc
cgccgggcgctgattgtggtgcccgattctctgatccaccagtggctggtggaaatgctt
cggcgtttcaatctgcgcttttccattattgatcaggcccggtacgacgacctcaaggcc
gaagaagatgatgtcgacgctctggttaaccatatttttggtgatgacgatgcggttaac
ccgttcgagtctgaccagttagtgctgtgtagcctcgacttcctggtgcgcagcgagaag
gcccgcaaagacgcggtggcggcgggctgggatctgatggtggtggacgaagctcatcac
ctggcctggtcgccggaacagtccagcccggaatacgatgtggttgagcagttgtccggt
gccagccagggcctgctgctgctgaccgcaacaccggaacagatcggcgtggccagccac
tttgcccgcctgcgcttgctcgacccggcccggttccacaatctggagaccttccgggaa
gaagagcagcactatgaagtgatcaatcaggtggtccggcgcctgcagcaggcgccggat
actatctcaaaagacgatcgacaggccctggccggttggctgggagatgagctggacgaa
ttgctggcccgggatgatgcccaccaggcggtgatcgatgcgttgctggatcgtcacggc
accgggcgagtgttgttccggaatacccgggccgccattcagggcttcccggagcgacag
ccgttaccggaacccctgccgtgcccggacctgtatggacaccatcaatacggtgtcacc
gggctggcgcccgagcaggcagtggatgaagaagactggctggcccaggatccccgggtg
agctggctggagaagaaactggccagcctgcgcccggccaaggtggtggtgatctgtgcc
aaagccagcacggccatggcgcttgagcattatctgcagttacgggccggtattcgcagt
gcagccttccacgaacaccttagtctgattgagcgcgaccgggccgcggcctattttgct
gatacggagcagggggcgcaggcgctgatctgttcggaaatcggcagcgaagggcgcaac
ttccagtttgcccaccacctggtgctgtttgatctgccggccaatccggatctgctggaa
cagcgcatcggtcgcctggaccggatcggccagactgaagccattcgaatccacattccc
tatcttcagggcaccagtcaggaggtacagtaccgctggttccaggaagggctgaatgcg
tttgccgagagctgcgccgtgggtgttgctgttcaggaacatgttaaggaccagtggcag
caggcgctggacggagacgaaagccagctggagcctttgctggcggccagtgcgtccgag
acggcgcgtctgaaagacatgctgcacaacggccgggatgcgctgattgaactgaactcc
tgtcgtgttgatgaggctgaggctttgatcgccgggatcgaggaagaggagaacgccgct
gaagtccgggactacatgatccaggctttcgatatcctcggcgttgacctggaagaccac
agtgagcatgcggatatcctgaagccgggcgagcagttccaggccggcctggtagcggag
cttccggaagacgggctgaccgttacctgggatcgtcagcaggcgttgcagcgcgaagat
atggcgttcatgagctgggagcacccgatggttaccggggtgatggattcggtgaatagt
tccgggctgggcaaggctgccctggccaatctctcggtcaaggctctgcccccggggacg
ctcctgctggaagccgtattcgcggtgcattgtccggcgcccgaatcgctgcagttgact
cggtatctgcccgtttcgcccctgcgcctggtggtggatgtgaatggccgggatctgtcc
aaggctctgccccatgaaaggctgaatgagctttgttccaatatccgtcgacgcacggcc
caggccatcgtgccgaaaatccgggccgaggtggaaaccatggtcgaccacgccgagaca
ctggcggagccgcatctgtcgccgcttcgcgaacaggcgctggggagggtagaagacagc
ttcatgccggagattcggcgtttggaagcactgaagaaagtgaatccggccatccgcaac
gaagaaatcgacttcctgcgtagccagctggatgccgcccgcagtgctgtagagcatgcg
tccctggccctggaaggtatccgtgtgattgtcacatcgtaa
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