Marinobacter nauticus ATCC 49840: MARHY3548
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Entry
MARHY3548 CDS
T02083
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc03420
Nucleotide excision repair
mhc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MARHY3548 (uvrD)
03430 Mismatch repair
MARHY3548 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhc03400
]
MARHY3548 (uvrD)
Enzymes [BR:
mhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MARHY3548 (uvrD)
DNA repair and recombination proteins [BR:
mhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MARHY3548 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
MARHY3548 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
CCG97003
LinkDB
All DBs
Position
complement(3651878..3654043)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSHIIDSLNDAQREAVTAQNDHLLVLAGAGSGKTRVLVHRMAWLMSVDRVPPTSILAV
TFTNKAAKEMRYRVEQMMQIPTRGLWIGTFHGIAHRLLRSHWKDAGLPENFQVLDSDDQL
RLIKRVMRENRIDESQWPPKQAQWFINSQKDEGLRADHIQENPGDHFTNTMLKIYRQYEK
LCQQGGLVDFGELLLRSHELWLHRPELLSHYQQRFQHMLVDEFQDTNTIQYAWLQVLASN
RVPLTVVGDDDQSIYGWRGAKIENIQQYQRDFPNSRLVRLEQNYRSTKTILKAANSVIAN
NQGRLGKELWTNGVEGEPISLYAAFNEQDEANYIADSISAWVSEGNLRSECAILYRSNAQ
SRVLEEALMRQGIPYRVYGGLRFYDRQEIRNALAYLRLVHYHRDDAAFERVVNIPTRGIG
AKSLQEIREYATGQGISLWESSERLLAAGQVKGRAKTGLQQFMEIINTLSEMAGHASLQG
LMKQAIESSGLKDYHASEKGEKGQARVENLEELVSALADYDVEEGVDPLAEFIAQAALDA
GESQADAHEDSVQLMTLHSAKGLEFPMVFLAGVEEGLFPHSMSLEEPGRMEEERRLAYVG
ITRAMKKLVLTYAESRRLYGQEKFHALSRFVREIPGDCLQEVRLRNTVTRPAMVERPNES
LFAQDSAQQSGFSLGQRVRHPKFGEGIVMNSEGTGHHTRVQVNFDEGAKWLVLAYAPLEA
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctctcatattattgattccctgaacgacgcccaacgcgaagcggtgacggcg
cagaacgaccatttgctggtgctggccggtgccggcagtggcaaaacccgcgtgctggtg
caccggatggcatggttgatgtcggttgaccgggtgccgcccacgtccattctggcggtg
actttcaccaacaaggccgccaaggaaatgcgttatcgcgtggagcagatgatgcagatt
cccacccgtggtctgtggatcggcacctttcacggaattgcccatcgtttgcttcgttcc
cactggaaagacgccggcttgccggaaaacttccaggtgttggacagcgacgaccagttg
cggctgatcaagcgagtgatgcgggaaaaccgcatcgatgaaagccagtggccgccgaaa
caggcccagtggttcatcaacagccagaaagacgagggcttgcgggcggatcatattcag
gagaatccgggcgatcacttcaccaacaccatgctgaagatctaccgccagtacgagaag
ctctgccaacagggcggcctggtggatttcggtgaactgctgctgcgttcccacgaactc
tggctgcatcgtccggaattgctgagtcactaccagcagcgcttccagcacatgctggtg
gacgagttccaggacaccaacaccattcaatacgcctggctgcaggtgctggccagcaac
cgggtgccgctgacggtggtgggcgatgacgaccagtccatctacggctggcggggcgcg
aagatcgagaatatccagcagtaccagcgggatttccccaattcccggctggtgcggctg
gagcagaactaccgctccaccaagaccattctgaaagccgccaactcggtgattgccaac
aaccaggggcgtttgggcaaggaactctggactaacggggtggaaggtgagccgatcagc
ctgtacgccgcgttcaacgagcaggatgaagccaattatattgccgattccatctcggcc
tgggtcagcgagggcaatctgcgcagcgaatgcgccattctctatcgttccaatgcccag
tcccgggtgctcgaagaagccctgatgcgccagggtattccttaccgtgtttacggcggg
ttgcggttctacgaccgtcaggaaatccgaaacgcgctggcttacctgcgcctggtacat
taccaccgggacgatgccgcctttgagcgggtggtgaatattcccacccgcggcattggt
gccaagagcctgcaggaaattcgtgaatacgccaccggccagggtatttccctgtgggaa
tcgtccgagcggttactggccgcgggccaggtgaagggccgggcgaaaaccggcctgcag
cagtttatggagatcatcaatacgctgtctgaaatggcggggcacgcttccctgcagggg
ctgatgaagcaggccatagagtccagtggcctgaaggattaccacgccagtgagaagggc
gagaagggtcaggcccgggtggagaacctggaggaactggtcagcgcgctggcggattat
gatgtagaagaaggcgtagatccgctggcggagtttattgcccaggcggcgctggatgcc
ggcgaatcacaggccgatgcccatgaggacagtgtgcagttgatgacgctgcattcggcc
aaggggttggagtttccgatggtgttcctggcaggtgttgaggagggtttgttcccgcac
agtatgtcgctggaggagcccgggcgcatggaggaagagcgccgcctggcctatgtgggc
attacccgggctatgaagaagctggtacttacttacgcggaatcccgtcggttgtatggc
caggagaagtttcatgcactgtcccggtttgttcgggagatcccgggggactgcctgcag
gaggtgcggttgcgtaatacggtgacgcggccggcgatggtggagcgaccgaatgagagt
ctgtttgcccaggattcggcccagcagtctggcttcagtctggggcagcgggttcggcat
ccgaagttcggtgagggtatcgtgatgaactccgagggtacggggcatcatacgcgggtg
caggtgaacttcgatgagggcgccaagtggctggtgctggcttatgcgcctttggaggcc
tgttaa
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