Marinobacter nauticus ATCC 49840: MARHY3653
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Entry
MARHY3653 CDS
T02083
Symbol
mutM
Name
(GenBank) formamidopyrimidine DNA glycosylase, also acts on 5-formyluracil and 5-hydroxymethyluracil
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mhc
Marinobacter nauticus ATCC 49840
Pathway
mhc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MARHY3653 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhc03400
]
MARHY3653 (mutM)
Enzymes [BR:
mhc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MARHY3653 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MARHY3653 (mutM)
DNA repair and recombination proteins [BR:
mhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MARHY3653 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Zn_ribbon_TFIIB
PSMbeta
Zn_ribbon_8
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
CCG97107
LinkDB
All DBs
Position
3778659..3779471
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTRQGIAPHCEGQTIQRVIVRNPSLRWPVPADLAEHLEGKTIRAVERRAKYL
FLHLETGSVIVHLGMSGSLRVITDDSPAMTHDHVELVLGNHRRLRFNDPRRFGCWLWTTD
WNRHPLISALGPEPLSEDFNGAWLFRLSRQKQTPVKSFIMDNHVVVGVGNIYANEALFKA
GIHPKRKAGRISLDRYHKLAEAIRETLSAAILMGGTTLRDFVNSDGKPGYFAQSLLVYGK
AGAPCTECNTPLKEIRMNNRSTVYCPRCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaattacctgaagttgaaaccacccgtcagggcatcgcgcctcactgcgaaggc
cagaccatccagcgggtaattgtccgcaaccccagcctgcgctggccggtgccggcggat
ctggccgagcacctggagggcaagaccatccgtgccgtggagcgcagggcgaaatacctg
ttcctgcacctggagactggttccgtgattgtccatctgggcatgtcgggcagtctcaga
gtgatcaccgacgacagccccgccatgactcacgatcacgtcgagcttgtcctcggcaat
catcgccgcctgcgcttcaatgacccgcgacgcttcggctgttggctgtggactaccgac
tggaaccggcatccactgatcagcgcgctcgggccggaacccttatccgaagatttcaac
ggcgcctggctttttcgcctgtcccggcagaaacagacgccggtcaaatccttcattatg
gacaatcatgtggtggtgggcgtgggcaatatctacgccaacgaagccctgttcaaggcc
ggcattcacccgaaacggaaagccggccgcatcagcctggaccgctatcacaagctggcc
gaggccatccgggaaaccctcagcgccgccatactgatgggcggcaccactctgcgggac
ttcgtcaacagcgacggcaaaccggggtatttcgcccagtcactactggtttatggcaag
gcgggagcgccctgcaccgaatgcaacaccccgctgaaagagatccgcatgaacaaccga
tcgacggtttactgcccccgatgccagcgctga
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