Marinithermus hydrothermalis: Marky_0110
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Entry
Marky_0110 CDS
T01457
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhd
Marinithermus hydrothermalis
Brite
KEGG Orthology (KO) [BR:
mhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhd03032
]
Marky_0110
03400 DNA repair and recombination proteins [BR:
mhd03400
]
Marky_0110
Enzymes [BR:
mhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Marky_0110
DNA replication proteins [BR:
mhd03032
]
Prokaryotic type
DNA Topoisomerases
Marky_0110
DNA repair and recombination proteins [BR:
mhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Marky_0110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Sigma70_r4
Toprim_4
PAS_4
Sigma70_r4_2
DUF7340
DUF2256
DUF6011
Zn_ribbon_ISL3
Motif
Other DBs
NCBI-ProteinID:
AEB10873
UniProt:
F2NLP3
LinkDB
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Position
complement(105315..107801)
Genome browser
AA seq
828 aa
AA seq
DB search
MPGKTLVVVESPAKAKTIARILGDGYEVKASKGHVADLPERTLGVDLEADFAPTYEIKKD
KRPVVEALRKAARGAERVILATDPDREGEAISWHVARLLDLDPSAPVRVHFHEITPRVVR
EAIAHPAPINQNLVDAQQARRVLDRLVGYNLSPLLSEKFRQRALSAGRVQSVALRLIVER
EEEIEAFEPQEYWTVSGAFTAGAPFTAELYSIDGQRVVDKNRSRFLLTSEAETARILEAI
RRVPEWRVAEVARKTRRKSPPPPFTTSTLQQAASSRLGWTASRTMRVAQRLYEGVDLPEG
TVGLITYMRTDSVRVAPEALEAVRRFIPEAFGPAYLPQTPNRFKSKKSGVQDAHEAIRPT
AVERTPERVKPHLSEEEYRLYTLIWQRFVASQMSPAVYDQTVVTVEGGAYRFRATGSVLR
FDGYLRAWGREEDEAEQLLPEIPEGAPAQLTDLTPAQHFTQPPPRYNDASLVKTMEELGI
GRPSTYAPTIETLERRRYIERQGRALRPTPLGREVVAFLKAHFPRVVAYEFTAEMENRLD
AVEEGKVPWPKVVREFFEPFTKELEKVPRKTCPLCGRPLELKVSRYGQFLGCTGYPECRY
TEPLEKREAEPLGEPCPECGRELVRKHGRYGTFIACSGYPECTYTRDEAPSTGLTCPKCR
EGEVVVKTSRKGKPYYRCNRKACDFLSFYPLVEERCDTCGWNLMEKGRAKTRVCSNPACP
RYGGPDLSKPRPSRKSRATRRAAKPKPAPAPKATWTDLEPFLSRLAEDEARLARLVEGEG
RSLKDAAQALGLTEEAAAALYKRAIFKLRMAYGRARKAGEGSVPEEVT
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcaagacgctcgtcgtcgtcgagtcccccgccaaggccaagaccatcgcccgg
atcctgggcgacgggtacgaggtcaaggccagcaaggggcacgtcgcagacctacccgaa
cgcacgctgggggtggacctcgaggcggacttcgcccccacctacgagatcaagaaggac
aagcgcccggtcgtggaagctctgcgcaaggcggcccgcggagccgagcgcgtgatcctc
gcgaccgacccggaccgtgaaggcgaggcgatcagttggcacgtggcgcgcctgttggac
ctcgaccccagcgcgccggtgcgggtgcacttccacgagatcacgccccgcgtggtgcgg
gaagccatcgctcaccccgcgcccatcaaccagaacctggtggacgcccagcaggcccgg
cgggttctggaccggctggtggggtacaacctctcccccctgctctcggagaagttccgc
cagcgggcgctctccgcggggcgggtgcagtccgtggcgctgcggctcatcgtggagcgc
gaggaggagatcgaggccttcgagccccaggagtactggacggtctccggggcgttcacc
gcgggcgcgcccttcaccgcggagctctacagcatcgacgggcagcgcgtcgtggataaa
aaccgcagccgattcctcctcacgagcgaggccgagaccgcccgaatcctcgaggcgatc
cggcgggtgcccgagtggcgcgtggccgaggtggcgcgcaagacccgccgcaaatccccc
ccgccgcccttcaccacctccaccctccagcaggccgcgagcagccggctcggctggacc
gcgagccgcacgatgcgcgtcgcgcagcgcttgtacgagggggtggacctccccgagggc
accgtggggctcatcacctacatgcgcaccgactcggtgcgcgtcgcgcccgaggcgctg
gaagcggtgcggcgcttcatccccgaggccttcggtcccgcctacctcccccagaccccg
aaccggttcaagagcaaaaaaagcggggtgcaggacgcccacgaagcgatccggcccacc
gcggtggagcgcacgcccgagcgggtcaagccccacctctccgaggaggagtaccggctc
tacacgctcatctggcagcggttcgtcgccagccagatgagccccgcggtgtacgaccag
accgtcgtcacggtcgagggcggcgcgtaccggttccgcgcgaccggctcggtgctgcgc
ttcgacgggtacctccgggcctgggggcgcgaggaggacgaagccgaacagctcctgccc
gagatcccggaaggcgcgcccgcccaactcacggacctcacgcccgcgcaacacttcacc
caaccccccccgcgctacaacgacgcctccctggtcaagaccatggaggaactcgggatc
ggccggccctccacctacgcccccaccatcgagaccctcgagcgccgccgctacatcgag
cgccaggggcgcgccctgcgccccaccccgctgggccgggaggtggtggccttcctaaaa
gcccacttcccgcgggtggtggcgtacgagttcaccgcggagatggagaaccggctggac
gcggtcgaggagggcaaggtcccctggcccaaggtggtgcgggagttcttcgagcccttc
accaaggaactggagaaggttccccgaaaaacctgccccctctgcggccggcccctcgag
ctcaaggtcagccggtacgggcagttcctggggtgcaccggctacccggagtgccgctac
acggagcccctcgagaaacgcgaagccgaacccttgggcgagccctgccccgagtgcggg
cgcgagctcgtgcgcaagcacggccggtacggcaccttcatcgcttgcagcgggtacccg
gagtgcacctacacccgcgacgaggctccctccacggggctgacctgccccaagtgccgc
gagggcgaggtcgtcgtcaagaccagccgcaagggcaagccctactaccgctgcaaccgc
aaggcgtgcgacttcctcagcttctaccctctggttgaggagcggtgcgacacctgcggc
tggaacctgatggagaagggccgggccaagacgcgcgtctgctccaaccccgcctgcccg
cgctacggcggccccgacctctccaaaccccgtccctcccgcaaatcccgcgccacgcgc
cgcgccgccaagcccaaaccggcccccgccccaaaagccacctggacggacctcgagccg
ttcctttcgcgcctcgcggaggacgaggcgcggctcgcgcggctggtggaaggggagggt
cggagcttaaaggacgccgctcaggccctggggctcacggaggaggccgcggccgcgctg
tataagcgggcgatcttcaagctgcgcatggcctacggccgcgcgcgcaaagccggggaa
gggtcggttccggaggaggtcacgtga
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