Marinithermus hydrothermalis: Marky_0866
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Entry
Marky_0866 CDS
T01457
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mhd
Marinithermus hydrothermalis
Pathway
mhd03410
Base excision repair
mhd03430
Mismatch repair
mhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Marky_0866
03430 Mismatch repair
Marky_0866
03440 Homologous recombination
Marky_0866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhd03400
]
Marky_0866
DNA repair and recombination proteins [BR:
mhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Marky_0866
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Marky_0866
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Marky_0866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_C
DHH
RecJ_OB
DHHA1
PhoU
Motif
Other DBs
NCBI-ProteinID:
AEB11612
UniProt:
F2NP24
LinkDB
All DBs
Position
834202..836349
Genome browser
AA seq
715 aa
AA seq
DB search
MSRWIMAPWPPREALEALMQRLDVPPVVAAVLYNRGFRDPQDLDPPLALPDLPGLETAAR
RVVQALERGERIRVHGDYDADGVTGTAILVRGLAALGGDVHAFIPHRIREGYGVHPDRVA
EHAQACDLFITVDCGVTNHAELEALQAQGVSVIVTDHHAPGDTPPPGILVHPAFAPAFKG
KPKPTGAGVAFFLLWQVHALLDKPPPTVYADLAAIGTIADVAPLLGINRALVRAGLEQLR
ETRHAGLAALAREHCKEYSATEIAFRIAPRINAAGRLGEAETALEALTTPDPTRAQALAE
RLNELNRERQRVEEAMLERLLPNLDPAAPAYVIHDPEGHPGVMGIVASRILERFYKPVFI
IAQGKGSVRSTPGISAVGALRAAAAHLERFGGHTQAAGFAIAEEKIPAFRNAILEYVAAH
PPPVPEVLLDGALEGEDLEEVYRALLFLEPFGEGNPEPTFYFRGVPQEVRLMGEGRHVSF
RLGGVRVVKWRDDGEALLDVEEVEVAASLTLNEWNGTRKLELIAAAYRRPEGLEAGVRDD
APRLRVTRASLREALAQVVRERLPSYAVGKGRDFLEARGVPVVAPQEARVWFALPPTPVG
GVEVRLALSDRALASLTNPTITRQGLRAAFQALRAGRAVTEPYRTVLEELGLVPCPDPLP
RINPYRSATFRRLRLQQVLGARLALAYRYGDERLLVEALERWWEVNRVQAAQGSV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctggatcatggccccctggccgccgcgggaggccctcgaggccttgatgcag
cgcttggacgtgccgcccgtggtggcggcggttctgtataaccgcgggtttcgcgacccc
caggacctcgacccccccctcgccttgccggacctgcccggcctcgagaccgcagcgcgc
cgcgtggtgcaggccctcgagcggggggagcgcatccgggtgcacggggattacgacgcg
gacggcgtgaccggaaccgcgatcctggtgcgcggcctcgccgcgctcggtggggacgtg
catgccttcattccccaccgcatccgggaagggtacggcgtccacccagaccgcgtcgcc
gagcacgcccaggcctgcgacctgttcatcacggtggattgcggcgtgacgaaccacgcg
gagcttgaggccctacaggcgcagggagtctcggtcatcgtgaccgaccaccacgcgccc
ggcgatacgcccccacccggcatcctcgtgcacccggccttcgccccggccttcaagggc
aagcccaaacccaccggggctggggtagccttcttcctcctgtggcaggtccacgccctc
ttggacaagccaccccccacggtctacgccgacctcgcggcgatcggcaccatagcggac
gtcgcgccccttttggggatcaaccgcgctctggttagggctggcctcgagcagctgcgc
gagacgcgccacgcgggcctcgccgcgctcgcgcgggagcattgcaaggagtacagcgcg
accgagatcgccttcaggatcgcgccgcgcatcaacgccgcgggtcggcttggcgaggcc
gagaccgccctcgaggccctgaccaccccggaccccacgcgggcccaggcgctcgccgag
cgcctgaacgagctgaaccgcgagcggcagcgcgtcgaggaggcgatgctcgagcggctc
cttcctaacctcgaccccgctgcgcccgcctacgtgatccacgatcccgaggggcacccg
ggcgtgatggggatcgtggcgagccgcatcctcgagcggttctacaagcccgtcttcatc
atcgctcaaggtaagggctcggtgcgcagcacgccggggatcagcgcggtgggggcgttg
cgtgcggcggcagcgcacctcgagcgcttcgggggacacacccaggccgcggggttcgcc
atcgcggaggagaagatcccggccttccgaaacgccatcctggagtacgtggccgcgcac
ccgcccccggtgcccgaggtgctcttggacggtgcgctcgagggggaggacctggaggag
gtgtaccgggcgttgttgttcctcgagccgtttggggaggggaatcccgagccgaccttt
tactttcggggcgtgccccaggaggtgcgcctcatgggggaggggcggcacgtgtccttc
cggctggggggggtgcgggtggttaagtggcgggatgacggcgaggccctcctcgacgtg
gaggaggtggaggtagccgcgagcctcacgctgaacgagtggaacggcacccgcaagctc
gagctcatcgcggcggcgtaccggaggccggaggggttggaggccggggtgagggacgat
gcgccgcgcctacgcgtgacgcgcgcatcgctccgcgaggcgctcgcgcaggttgtgcgg
gagcgcctgccgagctacgcggtggggaagggccgggattttctggaggcgcgcggggtg
cccgtggtcgcgcctcaagaggcacgggtgtggttcgcgctaccccccacacccgttggg
ggggtggaggtccggcttgcgttgtcggaccgggcgcttgcttccctgacgaaccccacg
atcacgcggcaagggttgcgggcggcctttcaagccctgagggcggggcgggcggtgacg
gaaccgtaccgcaccgttctggaggagctgggcctcgtgccctgcccggacccgctcccc
cggatcaacccctaccgttccgccaccttccgccgtttgcgcctgcagcaggtgctggga
gcgcggcttgcgcttgcctaccgctatggggatgaacgcttgctcgtggaggcgctcgag
cgctggtgggaggtgaaccgtgtacaagcagcccagggatccgtttga
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