Marinithermus hydrothermalis: Marky_0969
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Entry
Marky_0969 CDS
T01457
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mhd
Marinithermus hydrothermalis
Pathway
mhd03030
DNA replication
mhd03430
Mismatch repair
mhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Marky_0969
03430 Mismatch repair
Marky_0969
03440 Homologous recombination
Marky_0969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhd03032
]
Marky_0969
03400 DNA repair and recombination proteins [BR:
mhd03400
]
Marky_0969
Enzymes [BR:
mhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Marky_0969
DNA replication proteins [BR:
mhd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Marky_0969
DNA repair and recombination proteins [BR:
mhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Marky_0969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEB11713
UniProt:
F2NL94
LinkDB
All DBs
Position
942974..943720
Genome browser
AA seq
248 aa
AA seq
DB search
MIPAPYRLASRLVRLLREAKQPASPEVLAAHLLAARRVPSSERFLREVLDGRFWQEGGRV
GLWEWRYAFPPPGEPVVVLDLETTGLSPERDEIIEVALIRVEGARRLEYSRLVNPGRPIP
PRITRLTGIRSGDVRDQPDVYTVLEEVVPLLEGATLVIQNAPFDLGFLRPRFAKLSVTIR
NEVIDTVQWARRALPGMRRRSLDHLIEVFEVPKRSRHRAFEDAEATLAVAYELYYMLTAG
KARALGEV
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggccccctaccgcctggcgagccgtttggtacgcctgctgcgggaagcgaaa
caacccgcctcccccgaggtactggccgcgcacctcctcgcggcgcggcgcgtcccctcg
tcggaacgctttttacgcgaggtgctggacggccggttctggcaggagggcggaagggta
gggctttgggagtggcggtacgccttcccaccgccgggagaacccgtggtcgtgctggac
ctcgagaccacgggactaagcccggaacgcgacgagatcatcgaggtagccttgatccgc
gtggaaggcgcgcgccgcctcgagtacagccgcctcgtcaaccccggccggcccataccg
ccgagaatcacgcgccttacagggattcgttcgggggacgtgcgggatcagccggacgtg
tacacggtgctcgaggaggtcgtgccgctcctggaaggcgcgacgctggtgattcagaac
gctccgtttgatctggggtttttgcgcccgcggtttgctaagctgagtgttacaatacga
aacgaagttattgacacagtgcagtgggcgcggagggcgttgccgggaatgagacgcagg
agtttagaccaccttatcgaggtgttcgaggttccaaaacggagccggcatcgcgcgttc
gaggatgcggaggccacgctcgccgtggcctacgaactgtattacatgctgacggccgga
aaggctcgggctttgggggaggtctaa
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