Marinithermus hydrothermalis: Marky_1136
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Entry
Marky_1136 CDS
T01457
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mhd
Marinithermus hydrothermalis
Pathway
mhd03030
DNA replication
mhd03410
Base excision repair
mhd03420
Nucleotide excision repair
mhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Marky_1136
03410 Base excision repair
Marky_1136
03420 Nucleotide excision repair
Marky_1136
03440 Homologous recombination
Marky_1136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhd03032
]
Marky_1136
03400 DNA repair and recombination proteins [BR:
mhd03400
]
Marky_1136
Enzymes [BR:
mhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Marky_1136
DNA replication proteins [BR:
mhd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Marky_1136
DNA repair and recombination proteins [BR:
mhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Marky_1136
NER (nucleotide excision repair)
GGR (global genome repair) factors
Marky_1136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
Taq-exonuc
5_3_exonuc
NYN_YacP
HHH_2
TraI_hel_assoc_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AEB11877
UniProt:
F2NP76
LinkDB
All DBs
Position
1115821..1118325
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AA seq
834 aa
AA seq
DB search
MQQPSLFDHRPERILIVDGHHLAYRNYFALGELTTSRGEPVQAVYGFARTLLKLLKEDGD
CVIVVFDAPQPSFRHEQFAAYKAQRAPTPEDFKPQLEKIKQLVDLLGLARFELAGYEADD
VIGSLAKKAEAEGYEVRIVTSDRDSYQLLSDKVRVLKPDGEEVTPETVREKYGVTVAQWV
DFRALTGDASDNIPGVRGIGAKTAAKLLAEWGSLENLYAHLAEVTPPSVRKKLEAGREKA
ALSRALSEIHTDLAIEVDFAACHRRPVDREALRAFLEALEFGSILRELGLIEARSAEEAP
WPPPPEAFLGYVLDRPQPMWAELKGLAGAWEGRVARGPARAKELARFEAVHALQAKDLTV
WARREGVRVQPGEDPLLLAYLYDPTNSDPAATVRRYGAGDWSEDPAARALAAAELWRILG
ERLAGEEALWWLYREVERPLAGVLAEMEHAGVRVDVAYLEALSAELGREIAAIEAEVHRL
AGRAFNLNSRDQLEVILYDELGLTPTRRTQKTGRRSTSAAALEALVGAHPIVERILAYRE
LSKLKGTYLDPLPRLVHPATGRIHTRYHQTGTATGRLSSSDPNLQNIPVRTEVGRRIRRA
FVAEPGYVLVAADYSQIELRVLAHLSGDENLKRVFQERRDIHTQTASWMFGVPPEAVDPF
RRRAAKTVNFGVLYGMSPHRLSRELGIEYAEAERFIQRYFESYPRVQAYIERTLEQAREK
GYVETLFGRRRYIPDIRSRNRNVREAAERMAFNMPVQGTAADLMKLAMVKLAPEIRSLGA
RLILQVHDELVLEAPQERAEAVARVVREVMEGAWALDVPLEVEVGIGENWLEAK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
gtgcaacagccgagcctgttcgatcaccgtcctgaacgcatcctgatcgtggatgggcac
cacctggcttaccggaactactttgccttaggggagttgacgacgagccggggggagccg
gtccaggccgtgtacgggtttgcccgcaccctgttgaagctgctgaaggaggacggggat
tgcgtgatcgtggtcttcgacgcgccccagccctcctttcggcacgagcagttcgcggcg
tacaaggcccaacgcgcccccaccccggaggacttcaagccgcagctcgagaagatcaag
cagctcgtggatttactcggcctcgcgcgcttcgagctcgcggggtacgaggccgacgac
gtgatcggcagcctcgccaaaaaagccgaggccgaggggtacgaggtgcgcatcgtcaca
agcgaccgggacagctaccagctgctttccgataaggtgcgggtcctcaagccggacggg
gaggaggtcaccccggagacggtccgggagaagtacggggtgacggtcgcgcagtgggtg
gatttccgcgccctgaccggggacgcgtcggacaacatccccggggtgagggggatcggc
gcgaaaaccgcggcgaaactcctcgccgagtggggcagcctcgagaacctgtacgcccac
ctcgcggaggtcacgccccccagcgtgcgcaagaagctggaggccggccgggagaaggcg
gcgttgtcgcgcgccctctccgagatccacaccgacctcgcgatcgaggtggattttgcc
gcctgccaccggcgcccggtggaccgcgaagcgcttcgggccttcttggaggcgctcgag
ttcggctccatcctgcgcgagctgggcctgatcgaggcgcgttcggcggaggaagcccct
tggccaccgccaccagaggccttcttggggtacgtgctggaccggccgcagcccatgtgg
gccgagctcaaagggctcgccggggcctgggaggggcgcgtggcccgggggccggcgcgc
gccaaagagctcgcgcgcttcgaggccgtgcacgccctgcaggccaaggacctcacggtc
tgggcccggcgcgagggggtgcgcgtgcagccgggcgaggaccccttgctgttggcgtac
ctgtacgaccccacgaacagcgaccccgcagccaccgtgcggcgctacggggcgggggac
tggtcggaggaccccgccgcccgcgccctggccgcggcggaactgtggcgcatcctaggc
gagcggctcgcgggagaggaggccttgtggtggctgtaccgtgaggtggagcgacccctt
gccggggtgctcgcggagatggagcacgccggggttcgcgtggacgtcgcctacctcgag
gccctctccgccgagctcggccgggagatcgcggcgatcgaggccgaagtgcaccggctt
gcggggcgcgcgttcaacctgaactcgcgcgaccagctcgaggtgatcctctacgatgag
ttgggcctgacccctacgcggcgcacgcagaagaccggccggcgctcgacctcggccgcg
gcgctggaggccctcgtgggggcgcaccccatcgtggagcggatcctggcgtaccgggag
ctctccaaactcaagggcacctacctggaccccctgccgaggctggtgcaccccgcgacg
ggccggatccacacccggtaccaccagaccgggaccgctaccggtcggctctcgagctcc
gacccgaacctgcagaacatcccggtgcgcaccgaggtgggccgtcggatccgccgggct
tttgtggccgagccggggtacgtcctggtggccgcggactactcgcagatcgagctgcgg
gtcctcgcgcacctctccggggacgagaacctcaagcgcgtcttccaggagcgccgggac
atccacacgcagaccgcgagctggatgttcggcgtgcctcccgaggcggtggaccccttc
cggcgccgtgcggccaagaccgtgaacttcggggtgctctacggcatgtccccccaccgc
ttgagccgcgagctcgggatcgagtacgcggaggccgagcggttcatccagcggtacttc
gagtcctacccgcgcgtccaggcctacatcgaacggaccctggagcaggcccgcgagaag
gggtacgtcgagaccctgtttggccggcggcggtacattcccgacatccgctcccggaac
cgcaacgtgcgcgaggccgccgaacgcatggccttcaacatgccggtgcagggcacggcc
gcggacctgatgaagctggcgatggtgaaactcgcgcctgagatccgctccctcggggcg
cgcctcatcctgcaggtgcacgacgagctggtcctcgaggcccctcaggagcgggcggag
gcggtggcccgggtggtgcgggaggtcatggagggcgcgtgggcgctggatgtgcccctc
gaggtcgaggtcgggatcggggagaactggctggaggccaagtga
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