Marinithermus hydrothermalis: Marky_1312
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Entry
Marky_1312 CDS
T01457
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhd
Marinithermus hydrothermalis
Pathway
mhd03420
Nucleotide excision repair
mhd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Marky_1312
03430 Mismatch repair
Marky_1312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhd03400
]
Marky_1312
Enzymes [BR:
mhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Marky_1312
DNA repair and recombination proteins [BR:
mhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Marky_1312
MMR (mismatch excision repair)
Other MMR factors
Marky_1312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEB12049
UniProt:
F2NK78
LinkDB
All DBs
Position
complement(1306739..1308889)
Genome browser
AA seq
716 aa
AA seq
DB search
MDLLRDLNPAQREAVQHYTGPALVVAGAGSGKTRTVVHRIAYLIRHRGVYPTEILAVTFT
NKAAGEMKERLARMVGPAARELWVSTFHSAALRILRVYGEYIGLKPGFVVYDEDDQLALL
KEVLGGLGLETRPQYARGVIDRIKNRMWSVDAFLREAEDWVGGLPKEQMAAVYQAYEARM
RALGAVDFNDLLLKVIGLFEAHPEVLHRVQQRARFIHVDEYQDTNPAQYRLTRLLAGAER
NLMVVGDPDQSIYGFRNADIHNILNFEKDYPDARVYRLEENYRSTEAILRVANAVIEKNA
LRLEKTLRPVRSGGDPVFLYRAPDHREEAAFVAREVQRLKGRGRRLDEIAVLYRTNAQSR
VLEEAFRRQNLGVRIVGGVGFYERREVKDVLAYARAAVNPADDLAVKRVLNVPARGIGQT
SLAKLSQLAETARVSFFEALRRAGEVLARPQAQAVQRFVALIEGLANAAYDTGPDAFLRL
VLAETGYADMLRREPDGEARLENLEELLRAAREWEEQHAGTIADFLDEVALTARAEEPEG
EVPAEAVTLMTLHNAKGLEFPVVFIVGVEEGLLPHRSSTARVEDLEEERRLFYVGITRAQ
ERLYLTLSEERETYGRREAVRASRFLEDIPEAFLQPLSPFGEPLGAGREPVAVRPTRRSS
AAGGFRGGEKVRHPRFGQGLVVAASGEGDRQEVTVHFAGVGLKKLLVKYAGLERIE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggacctgcttcgcgatttgaatccagcccagcgagaggctgtgcagcactacaccggg
cccgccctcgtggtggccggggcggggtcggggaagacccgcacggtggtgcaccgcatc
gcgtacctgatccggcaccggggggtgtaccccacggagatcctcgcggtgaccttcacc
aataaggccgcgggggagatgaaggaacgcctcgcccggatggtggggccggcggcgcgg
gagctttgggtttccacctttcactcggcggcgctgcggatcctgcgcgtgtacggggag
tacatcgggttaaagcccgggtttgttgtgtacgatgaggacgaccagctcgcgcttttg
aaggaggtgctgggggggttgggcctcgagacccgcccgcagtacgcgcgcggcgtgatc
gaccgcatcaagaaccggatgtggagcgtggacgcgtttttacgcgaggcggaggattgg
gtggggggactgccgaaggagcagatggccgcggtgtaccaggcgtacgaggcccgcatg
cgggcgctgggcgccgtggacttcaacgacctgctccttaaggtgatcgggttgtttgag
gcgcacccggaggtcctgcatcgcgtgcagcagcgggcgcggttcattcacgtggacgag
taccaggacacgaaccccgcccagtaccgcctcacgcgcctgctcgcgggcgcggaacgc
aacctgatggtggtgggggatcccgaccagtccatctacgggttccgcaacgcggacatc
cacaacatcctgaacttcgagaaggactacccggacgcgcgcgtgtaccgcctcgaggag
aactaccgttcgaccgaggccatcctgcgcgtggcgaacgcggtgatcgagaagaacgcc
ttgcgcttggagaagacgctgcgcccggtccgttcgggcggggatccggtcttcctttac
cgcgctccggaccaccgggaggaggcggcgtttgtcgcgcgggaggtgcagcgcctgaag
gggcggggccgccgcctggacgagatcgcggtcctgtaccgcacgaacgcccagtcccgc
gtgctggaggaggcgttccgccggcaaaacctcggggtgcgcatcgtgggcggcgtgggg
ttctacgagcgccgcgaggtcaaggacgtcctggcctacgcccgcgccgcggtgaacccc
gcggacgacctggctgtaaagcgcgtcctgaacgtgccggcgcgcggcatcggccagacc
agcctcgcgaagctctcccagctcgccgaaacggcccgcgtgagcttcttcgaggccctg
cgccgcgccggggaggtcctcgcccgcccgcaggcccaggccgtgcagcggttcgtggcg
ctcatcgagggcctcgcgaacgccgcttacgacaccggtcccgacgccttcctccgcctg
gtgctggcggagaccgggtacgccgatatgctgcgccgggagcccgacggggaggcgcgg
ctcgagaacctcgaggaactcctccgcgccgcgcgggagtgggaggagcagcacgcgggc
acgatcgcagacttcctggacgaggtcgccctcaccgcccgggccgaggagcctgagggg
gaggtgcccgcggaggccgtgaccctcatgacgctgcacaacgcgaaaggcctcgagttc
cccgtggtcttcatcgtcggggtggaggaggggttgttgccgcaccgttcctccaccgcg
cgcgtggaggacctcgaggaggaacgccgcctcttctacgtgggcatcacccgcgcgcaa
gagcggctgtacctcaccctctccgaggagcgcgagacctacgggcgccgggaggccgtg
cgggcgagccggttcttggaggacatccctgaggcgttcctccagccgctctcgccgttc
ggggagcccctcggcgcggggcgcgagccggtggctgtacgcccaacgcgccgctcaagc
gccgcgggcgggttccgcgggggggagaaggtgcggcacccccggtttggccagggcctg
gtggtggcggcctcgggagagggggaccgccaggaggtgacggtgcacttcgcgggagtc
gggctgaagaagctcttggtgaagtacgcgggcttggagcggatagaataa
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