Marinithermus hydrothermalis: Marky_1321
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Entry
Marky_1321 CDS
T01457
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mhd
Marinithermus hydrothermalis
Brite
KEGG Orthology (KO) [BR:
mhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhd03400
]
Marky_1321
DNA repair and recombination proteins [BR:
mhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Marky_1321
Archaeal homologous recombinant proteins
Marky_1321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
ABC_tran
AAA_21
CENP-F_leu_zip
AAA_15
NTPase_1
NACHT
cobW
DUF87
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEB12058
UniProt:
F2NLF9
LinkDB
All DBs
Position
complement(1317260..1319977)
Genome browser
AA seq
905 aa
AA seq
DB search
MRPLRLVVAGFGAYREPQEIPFDDVELFAITGPTGSGKSTLLDAICFALYGKTPRAGGRG
FRELKHPGVDAARVSLEFSVGSQVYRVVRTLGTRENQHRLEALEDGRWRTLPESDRVRTL
NQKLEAILGLDYDAFIRAILLPQGEFDLFLKGDASERRELLSALYGLEGVAAMRERAMAH
LKEAEGALERVEGALGGLEATDEAALEALREEIAHLEREEAEANRRLEAAQQALKEVEAR
YARHVEHEKLRRRHAAWKAEAARIERIRERLAQAERAERIWPHLEALERAQQAVHQAARE
LAETERRLKAARTQRDRLLEAYDPAALERVKLRQAELEHLRAQEERLLRYGGGLDRTHSA
PLPFDEARVEALREAQARFRDLQQLKKNLGRAQARLEEERRQLNAREAEHARLAEELAAL
EREGKALRAQHETARARLEEARQRAGVLAYRALLRPGEPCPLCGQTVHRVPEGGAPDLDA
LERAEREAKERLEALREAYLTCRARRDALQEGLPAERNRVEELAREVEEWQGQVRAVEAE
LGVWPGPEAVAEELERRLAGLAAALREATDGRGVAAYARALQAQRARLEAQAQRLEALAR
ELQALEERHGRLEEARRERERTAAQLEASVEALLREGGFAHPEEVRAARLADEERQAWLE
RVQAHEQEGVYLEGRLRDLEQTLETDDPVTEEAVRAQRQAVEALQAQLRALGQKLGERRA
VKERMEQDLERKRALLAERARLVSAVDVWQRLAQDLKGGNFPDYLLNRYQVGLVQRASEL
LKTLSSGRYRFRLHEGEYYVEDLWTEAVRSARTLSGGETFLASLSLALALSEHLSRGRLG
ALFLDEGFGTLDQETLELAAGVLETLPTQGRLVGVVTHVIALAERFPARLVVEKHPAGSR
VRWEA
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgttgcggttggttgtggcggggttcggggcgtaccgcgaaccccaggagatc
ccatttgacgacgtggagctcttcgcgatcaccggaccgaccgggtcggggaagagcacc
ttgctggacgcgatctgcttcgccctctacgggaaaaccccccgcgcgggcgggcggggg
tttcgcgaactgaagcaccccggggtggacgcggcccgcgtgagcctcgagttcagcgtg
gggtcgcaggtgtaccgggtggtgcggactctgggcacccgggagaaccagcaccggctc
gaggctctcgaggacggccgctggcgcaccctgcccgagtccgaccgggtgcgcacgctc
aaccagaagctcgaggcgatcctcggcctggactacgacgcgtttatccgggcgatcctg
ttgccgcaaggcgagttcgacctgttcctaaagggcgacgcgagcgaacgccgcgagctc
ctctcggccctgtacggcctcgagggcgtggccgcgatgcgcgagcgcgccatggctcac
ctcaaggaggcagaaggtgcgctggagcgggtggagggggcgctaggcggcctagaggca
accgatgaggccgcgctagaggccctgcgtgaggagatcgcgcacctggagcgcgaagag
gctgaggccaaccggcgcctcgaggccgctcaacaggccttaaaagaggtggaggcccgc
tacgcgcgccacgtggagcacgagaagctgcggcggcggcacgcggcctggaaggcggaa
gccgcgcggatcgaacgcatccgcgaacgcctcgcgcaggccgagcgggccgaacgcatc
tggccgcacctcgaggccctcgaacgcgcccagcaggccgtgcatcaggccgcgcgcgag
ctcgccgagaccgagcggcgcctcaaagcggcccgcacccaacgcgaccggctcctcgaa
gcgtacgaccccgcggcgttggaacgcgtgaagctccgccaggcggagctcgagcacctg
cgcgcgcaggaggagcggctgttgcgttatggcggcggcctcgaccgcacgcactccgcc
cccctgccctttgacgaggcgcgcgtggaggcgttgcgcgaagcgcaggcccggttcagg
gacctccaacaactcaagaagaacctgggccgcgcccaggcgcgcctggaggaggagcgc
cggcagcttaacgcgcgcgaagcggagcacgcccgtctcgccgaggaactcgccgccctc
gagcgggaaggcaaggccctccgcgcccagcacgaaacggcccgcgcgcgcctggaggaa
gcgcgccagcgcgcgggcgtgctcgcctaccgcgcgctgttgcggcccggcgagccctgc
cccttgtgcggccagacggtgcaccgcgtgcccgaagggggcgcgccggatctggacgcc
ctggagcgcgcggaacgcgaggccaaggagcggcttgaggccctccgggaggcgtacctg
acgtgccgcgctcggcgggacgccctccaggaagggttaccggccgaacggaaccgcgtt
gaggagctggcgcgagaggtggaggagtggcaagggcaggttcgggcggtggaggcggag
ctcggcgtgtggccgggccctgaagccgtcgccgaggagctcgagcggcgcctcgccggc
ctcgcggccgcgttgcgcgaagctacggacggccgcggcgtggcggcgtacgcccgcgcc
ctccaggcgcaacgcgcccggctcgaggcgcaagcgcagcgcctcgaggctttggcgcgc
gagctgcaggcgctcgaggagcggcacgggcggctggaggaggcgcggcgcgagcgggag
cgcaccgcggcgcagctggaggcctcggtcgaggcgctgttgcgggagggcgggttcgcg
catccggaggaggtgcgcgcggcgcgccttgcggacgaggagcgccaggcctggctcgag
cgggtgcaggcgcacgagcaggagggcgtgtacctcgagggtcgcctccgcgatctggag
caaacccttgaaacggacgatcccgtgacggaggaggccgtgcgcgcgcaacggcaggcg
gtggaggcgttgcaggcccagctccgcgcgttggggcagaagctcggggagcggcgcgcc
gtgaaggagcggatggagcaggacctcgagcgcaagcgcgccctcttagcggaacgggcg
cggctggtgagtgcggtggatgtctggcagcgcctggcccaggacctcaagggcggcaac
ttcccggattacctgctcaaccgctaccaggtggggctggtgcagcgcgcttccgaactc
ctcaaaaccctctcctccggccgctaccggtttcgcttgcacgagggggagtactacgtg
gaggacctctggaccgaagcggtgcgctcggcccgcaccctctcgggcggcgagaccttc
ctcgcgagcctgtcgctcgccctagcgctttccgagcacctctcgcgcgggcgtttaggg
gccttgttcctcgacgaagggttcggtaccttggaccaggagaccctcgagctcgccgcg
ggcgtgctcgagacgctccctacccaggggcgcttggtgggggtggtcacgcacgtgatc
gccttggctgagcgcttcccggctcggctcgtggtggagaagcatcctgcggggagccgc
gtgcgttgggaagcatga
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