Marinithermus hydrothermalis: Marky_1372
Help
Entry
Marky_1372 CDS
T01457
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
mhd
Marinithermus hydrothermalis
Brite
KEGG Orthology (KO) [BR:
mhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mhd03016
]
Marky_1372
Enzymes [BR:
mhd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Marky_1372
Transfer RNA biogenesis [BR:
mhd03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Marky_1372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Cupin_3
Motif
Other DBs
NCBI-ProteinID:
AEB12107
UniProt:
F2NLK8
LinkDB
All DBs
Position
complement(1380075..1381910)
Genome browser
AA seq
611 aa
AA seq
DB search
MLDDVTLQAGALVLYKHRPALVRAVQGKIELEVQGGKRVRVRPKDVVLLHPGPLEDLAAL
EALPSGEVEAAWELLAGGETTLAELTELAYGAYTPQTAWAAWRAVCDGVYFEGTPEALRA
RTPEAVRALRAQREAAAREAAAWEAFIVRLKEGRVDAADRTRLAEVEALALGRARTSRVL
RALGRHETPENAHALLLEVGYWTPEVNPYPARFGVDPDPPCLEVPDLPQESRRDLTHLEA
YAIDDETTEDPDDALSLEVGDGGYRLWVHVADVGALVRPDSSLDRAARERGASVYLPEGT
IPMLPPEVARRLGLGLGEVSPALSFGLELSLEGELLGVEVVPSWVRVRRLTYAEAEARLE
EAPFLEMHRLAERLRARRAAAGAVFIELPEVKVRVVDGAVRIRPLPPLRSRALVREAMLA
AGVAAARFAIEHGIPFPFATQEPPGEHPELEGLAGMFAQRRALKRTQLRSVPAPHAGLGL
EVYAQATSPLRRYLDLVAHQQLRAFLRGEPLIPPQALLERVEAAEAVAGAVRQAERLSRK
HWTLVHLMRLSAWEGEGVLVERRGYQGVVLLPELGLEASITVPEALALNQSVRVRLGEVE
LARLEARFTLL
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgctagacgacgtgacgttgcaggcaggcgcgctcgtactgtacaagcaccgcccggcc
ctcgtgcgggccgtgcagggcaagatcgagctcgaggtgcaaggcggcaagcgcgtccgg
gtccgccccaaggacgtcgtgctgcttcaccccgggccgctggaggacctcgcggcactc
gaggcgctgccttcgggggaggttgaggcggcgtgggaactcctcgcgggaggggagacc
accctggcggaactcacggagctcgcctacggggcgtacacgccccagaccgcttgggcg
gcgtggcgggccgtgtgcgacggggtgtactttgagggcacgcccgaagcgctccgggcc
cgcacgcccgaggcggtccgcgcactccgggcgcaacgggaggccgccgcccgagaagcg
gccgcctgggaggccttcatcgtgcggctcaaggagggccgcgtggacgcggcggaccgc
acgcgcctggccgaggtggaggccctcgcgctgggacgcgcgcgcacgagccgcgtgctg
cgcgcgctggggcggcacgaaaccccggagaacgcgcacgctttgctcctcgaggtcggt
tactggacgcccgaggtgaacccgtaccccgcccggttcggggtggacccggacccgccc
tgcctcgaggttccggacctgccccaggagtcgcgccgggacctcacccacctcgaggcc
tacgcgatcgacgacgagaccacggaggaccccgacgacgccctgagcctcgaggtgggg
gacggggggtaccggctctgggtgcacgtggccgacgtgggggcgctggtgcggccggac
tcgagcctggaccgcgcggcgcgcgagcggggcgcgagcgtgtaccttcccgaaggtacg
atccccatgctgcccccggaggtggcgcggcggcttgggttggggctgggcgaggtctcg
cccgcgctctcctttggcctcgagctcagtctcgaaggggagcttctcggggtggaggtg
gtgcccagttgggtgcgcgtgaggcggctcacctacgccgaggccgaggcgcggcttgag
gaggccccgttcctggagatgcaccgcctcgccgagcggttgcgtgcccggcgggccgcg
gccggagcggtcttcatcgagctgcccgaggtgaaggtgcgcgtggtggacggcgcggtg
cggatccggccccttccgcccctgcgtagccgcgccctggttcgggaggcgatgcttgcg
gcgggcgtggccgcggcgcggttcgccatcgagcacggcatccccttccccttcgcgacg
caggagccccctggggagcacccggaactcgagggcctggcgggcatgttcgcccagcgc
cgggcactcaaacgtacgcagctcaggagcgtgcccgcgccgcacgcgggactgggactt
gaggtgtacgcgcaggccacgagcccgttacggcggtacctggacctggtcgcgcaccag
cagctgcgcgcgtttttgcggggcgagcctttgattccgccccaggccttgctggagcgg
gtggaggcggcggaggccgtggcgggagctgtgcgccaggcggaacgcttgagccgcaag
cactggacgctcgtgcacctcatgcgcttgagcgcgtgggagggtgagggggtcctggtg
gagcgccgcgggtaccagggggtggtgcttctgcccgaactgggcctcgaggcctcgatc
acggtgccggaggcgctcgcgctgaaccagtcggtgcgcgtccggctgggggaggtggag
ctggcgcgcttggaggcccggttcacgctgctctag
DBGET
integrated database retrieval system
