KEGG   Marinithermus hydrothermalis: Marky_1623
Entry
Marky_1623        CDS       T01457                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
mhd  Marinithermus hydrothermalis
Pathway
mhd03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mhd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Marky_1623
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mhd03021]
    Marky_1623
   03400 DNA repair and recombination proteins [BR:mhd03400]
    Marky_1623
Enzymes [BR:mhd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Marky_1623
Transcription machinery [BR:mhd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Marky_1623
DNA repair and recombination proteins [BR:mhd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Marky_1623
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AEB12358
UniProt: F2NKA9
LinkDB
Position
complement(1634645..1634947)
AA seq 100 aa
MAEPGIDQLLTLTDSKYRLTVVVARRAQQLLRYNFSNTVLEPRERPKMRTIDGEYPDPNP
VTWAMRELRTGRLRIGEDLVPEDRLARVMDQLYPQEPVEE
NT seq 303 nt   +upstreamnt  +downstreamnt
atggcggaacccggcattgaccaactgctcaccctaacggactccaagtatcgcctcacg
gtggtcgtggcgcggcgggcgcaacagttgctgcgatacaacttctccaacacggtgctc
gagccgcgcgagcgccccaagatgcggaccattgatggggagtacccggacccgaacccg
gtcacctgggcgatgcgcgagctgcgcacgggacgcctccgcatcggggaggatctcgtg
cccgaggaccggctggcgcgggtgatggaccagctgtacccccaagagcccgtggaggag
tag

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