Marinithermus hydrothermalis: Marky_1672
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Entry
Marky_1672 CDS
T01457
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mhd
Marinithermus hydrothermalis
Brite
KEGG Orthology (KO) [BR:
mhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhd03400
]
Marky_1672
Enzymes [BR:
mhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Marky_1672
DNA repair and recombination proteins [BR:
mhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Marky_1672
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEB12407
UniProt:
F2NKF8
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All DBs
Position
complement(1688690..1691392)
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AA seq
900 aa
AA seq
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MRVRVASAGTGKTTALVRRYLELLEAHPPHRVAAVTFTRAAAAQLKSRIYAGFSVLEREG
AYYGYVPPPERLPRLFSLKEAVLAAPIHTIHGFFAELLRLVAPAMGLDPDFQVLSAGDAT
GVFREEVRALLYLRGEDPGLEAPLMHLYEKRALARELRPAGPGAERLWALFRAAERRYLA
RLGGRALGPADVELRAVQMLTEPPNGALERIRGRYAHVLVDEYQDTNPLQGQAFEALEAA
GVSIEVVGDPKQSIYAFRNADVAVFRRALRRGVVEAPLAVSYRHAPGLVSFLNRLTQAFA
ERGWGFGPEEAPEVRSARSEGGRIELHWVTGEAALAELRQGEARVLAARLRALHDAGRPW
REMAVLIQSRGSLPALEAAFEAWGVPFVTAQARGFYGLLEVRDLYHALRVGFDARAHLSL
AAFLRGPFGGLSPRAVDAILAAEDPLAALEAYPEVAARVAEIRTWVRQTAPFEALKRLVR
TRFLGGKSYLEWLSPAARANVDALLLEFSRNPPARIEALLARLEELRWADEAGEVPAGGE
DAVRVVTVHAAKGLEWPVVAVFDLSRKRAHPGAPVFVRPEDGRFATREDPDFTEYQKAWE
AREAEEAYRLFYVAASRAAEHLILTGSVALKPDQEGRLAARFYGESWARTLWALEVDAWP
EVRARRWELKEVPAAPRVQRKEVQPPAGVPALMRPVRPGRYPPVYSPSALKAERAEALEV
DCVDPEASAGGDARAVGILTHYAIAQNWGPDDPEHFENLRAQEVMLAYAPEEQERLLAEV
RELLRAYRALLGRELPWPRDEDYPELPLALPHAGTVWEGVIDRLYRVGDRWYLEDYKTDR
TPRPERYAFQLALYRRGVREAWGIEPEVRLVFLRTREVVCLEPRLLEEAFQRGVGEAEPI
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
gtgagggttcgcgtcgcttccgccggcaccgggaaaaccaccgccctcgtgcggcggtac
ctcgagttgctggaggcgcaccccccccaccgggtggccgcggtgaccttcacccgcgcg
gcggccgcgcagcttaagagccggatctacgcggggttttcggtgttggagcgcgagggg
gcgtattacgggtacgtcccgccccccgagcgtcttccccgccttttcagcctgaaggag
gcggtgctcgccgcgcccatccacacgatccacggttttttcgctgagctgttgcgcctg
gtcgcgcccgctatgggactggacccggacttccaagtgctttccgcgggggacgcgacc
ggcgtgttccgcgaggaggtccgcgccctgctctacctgcgaggggaggatccgggcctc
gaggcgcccttgatgcacctctacgaaaagcgcgccttagcgcgagaactccgccctgca
ggaccgggggcggaacggctgtgggcgctgttccgcgccgcggaacgccggtacctggcc
cgtctcggcgggcgggctttggggccggcggatgtcgagctccgggccgtacagatgctg
accgaacccccaaacggcgcgcttgaacgcatccggggccggtacgcgcacgtcctggtg
gacgagtaccaggacacgaaccccttgcaaggccaggccttcgaggccctcgaggccgcc
ggggtttcgatcgaggtggtgggggacccgaagcagtccatctacgctttccgcaacgcg
gacgtcgccgtctttcgccgggccctgcgccgcggcgtggttgaggcgcccttggccgtc
agctaccggcacgctccgggcctcgtgagcttcctcaaccgcctcacccaggctttcgct
gagcgcggctgggggtttgggccggaggaggcccctgaggtgcgctctgcccgctcggaa
gggggacggatcgagctgcactgggttacgggcgaggccgcgcttgccgagctgcgccag
ggggaggcccgggtgctcgccgcgcgcctgcgggccctgcacgacgcggggcgtccctgg
cgcgagatggccgtcctgatccaaagccgcggcagcctccccgccctcgaggccgccttc
gaggcgtggggcgtgcccttcgtgaccgcgcaggcccgggggttctacggcctgctggag
gtgcgggacctgtaccacgccctccgcgtgggattcgacgcgcgcgcccacctctccctt
gcggccttcttacgggggccgtttgggggactgagcccccgcgcggtggatgcgatcctc
gccgcggaggaccccttggccgccctcgaggcctaccccgaggtggccgcgcgtgtggcg
gagatccgcacctgggtgcggcagaccgcgccgtttgaggcccttaagcgcttggtgcgc
acccggtttttgggggggaagagctacctggagtggttgagccccgcggctcgagcgaac
gtggacgccttgctgctggagttttcccggaaccctccggcgcgtatcgaggcgctgttg
gcccgcctcgaggagttgcggtgggcggacgaggcgggggaggtgcccgcgggtggtgag
gacgcggtgcgcgttgtgacggtgcacgcggcgaaggggttggagtggccggtggtcgcg
gtgttcgacctgagccgcaagcgcgcgcatccgggcgcgcctgtgttcgtgcgccctgag
gacggtcgatttgcgaccagggaggatccggacttcaccgagtaccaaaaggcttgggag
gcccgcgaggcggaggaggcctaccgcctcttttacgtcgcggcctcccgagcggcggaa
cacctgatcctgaccgggagcgtcgccctcaaaccggatcaagaggggcggttggcggcc
cggttttacggggaaagctgggcgcggacgctttgggcgctggaggtggacgcgtggcct
gaggtgcgggcccggcgctgggagctgaaggaggttcccgccgcgccgcgcgttcaacgc
aaggaggtccaaccgcccgcgggggtgccggcattgatgcgcccggtccggccgggccgc
tacccgcccgtgtactccccctcagccctcaaggccgagcgtgcagaggctctcgaggtg
gactgcgtggatcccgaagcctccgctgggggggacgcccgcgcggtgggcatcctcacg
cactacgcgatcgcccagaactgggggcccgacgaccctgagcacttcgagaacctgcgc
gctcaggaagtgatgctcgcttacgcgcctgaggagcaggagcgcctcctcgccgaggta
cgtgaactgctccgagcgtaccgcgcccttttagggcgcgaacttccctggccccgcgac
gaggattaccccgaactgcccctagccctgccgcacgcgggcacggtctgggagggggtg
atcgaccggttgtaccgggtgggggaccggtggtacctggaggattacaagaccgaccgc
accccccgtcccgaacggtacgcgttccagctcgccctgtaccgccggggggttcgggaa
gcgtgggggatcgagcccgaggtgcgcctggtgtttttacggacccgggaggtcgtctgc
ctcgagccccgcctcctggaagaagctttccagcgtggggtaggggaggccgagccgatc
tag
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