Mycoplasma haemocanis: MHC_05460
Help
Entry
MHC_05460 CDS
T01666
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mhe
Mycoplasma haemocanis
Pathway
mhe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mhe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MHC_05460 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mhe03021
]
MHC_05460 (rpoC)
03400 DNA repair and recombination proteins [BR:
mhe03400
]
MHC_05460 (rpoC)
Enzymes [BR:
mhe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MHC_05460 (rpoC)
Transcription machinery [BR:
mhe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MHC_05460 (rpoC)
DNA repair and recombination proteins [BR:
mhe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MHC_05460 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
SAM_TNK
Motif
Other DBs
NCBI-ProteinID:
AEW45946
UniProt:
H6N8H4
LinkDB
All DBs
Position
complement(835289..839197)
Genome browser
AA seq
1302 aa
AA seq
DB search
MARGRSSNAFRSQSSPNDFTIKALQISLASPEYVRSLSKGEVTSFETINYKSLRPEKGGL
FCESIFGPIKDYECSCGKYKQVKYKGKRCEKCKVYITQSLVRRDWMGHIELACPVAHIWM
IKELPLPAKISLILGIKYKHVEEVVYFVNYIVLDPGHLQVEGKTLFDPLEIIDVSNSKSS
IASLAKLRTLLRTIYETIQKENPESYLTDLNYQQGRAYYKALSNSNLPFSIMDMFEYIEK
HTGLKVGIGAEAIYELLKKVDLESLEYKLTQELNVNFPSGLNYADPKVRKILSRLQVIRW
FKESKNRPEWMILKVIPVIPPNLRPIIQLSGGRFTSSDINTFYRRIIVRNDRLARILNLN
VAHIISNNEKRMLQEAVDSLIDNSSRKKPLTARDRHPLKSITDHLKGKQGLFRQNLLGKR
VDYSGRSVIVVGSELKMYQVGLPILMILSLFKPFIIRDLIRKVDDNGVECVPIASNIKTA
SKMIMEQSDEIWPVVHKVIKERPVLLNRAPTLHRLSIQAFEPILVEGKAICLHPLVTTAF
NADFDGDQMAVHLPLSDEAVHEARSMLLAPWQILGPKDGKPIVTPSQDMVLGIYHLTTEN
KESIGSGSLFATPDEVVHAYQLGKVELSSIIAIGTSGFPKKRFPKSGVLITTVGKIIFNS
RLPEDYKFINQSEGMWVSENDILDYGVNRFYYINAYQEKDPFAKSVIGRLIEDLYDNYSC
QDLAPVLDSIKDMGFEYSTKSCTTISAFDVPKFSDKQSLLEEADKLVEQQKSFFRKGLVT
DDEKYKNVISIWSSVKDKVSDHIKNALKSKEFQNNPIVIMARSGARGNVSNFIQLSGMRG
LMNKSYNYDQNTNTKVVRDIIEVPIKHSFIEGLTVIEYFNSSYGARKGMTDTAMKTAKSG
YTTRKLVDAAQEVIVKVEDCGSNKGLIVEELRDKEHSMPIKTLRDRILFKCAHVNILHPE
TGEVIVGANEVITKEVADKIVSAGITKVQVRSVLHCRLKQGICQKCFGYDLTTKQMIDVG
TTIGVIAAQSIGEPAVQLTMRTFHSGGVAGESNISQGFERLRQLFEIVAPKKWETSVISE
ITGTVESIEIRDDERVVTVSSDINRREYNCDLNLPILVKKGQKINFGDRICDGSVDLKKL
LEVSGVEAVRKYIVQEIWKVYWIQGIDVSEKYIEIIVRQLTSRLKVLSPNDSKWAMGEIV
DYSSFVDECARLLLDGKTPPIATSIIFGLEEVPEKTNSFLAAASFQDTKKILTDACVRGQ
VDYLNSLKENIMVGNLIPAGTGLKSPEEVVSDERSYRNVFNY
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atggcaagaggtagaagttctaacgcttttagatctcaaagtagtcctaatgatttcacc
atcaaggctttgcagatttctttagcttctccagaatacgtaaggtctctttctaagggt
gaagttacttcttttgaaactattaattataaatctttgagaccggaaaaaggggggttg
ttttgtgaaagtatttttgggcccattaaggattatgagtgttcttgtggtaaatataag
caggtaaagtacaagggtaaaagatgtgagaagtgtaaagtatacattactcaatcttta
gttcgtcgtgactgaatgggtcatatagaattagcttgtccagttgctcacatctggatg
ataaaagagcttccacttcctgccaaaatttcccttatactaggcatcaaatacaaacac
gtagaagaagttgtttactttgtaaactatatagttttagatccgggacatctccaagta
gaaggaaagaccttattcgatcctttagagataatagatgtttctaattcaaaaagctct
attgcttctcttgctaaattaagaactcttcttagaactatatatgagactattcaaaag
gagaaccctgaatcgtatttaactgatttaaattatcagcaaggaagagcgtattacaaa
gctctttctaactcaaacttgcccttttcaattatggacatgtttgaatatattgaaaaa
catacaggtcttaaggtcggaataggtgcggaagctatttatgagcttcttaagaaagtt
gatcttgagagtttagagtacaaattgactcaggagcttaatgtcaacttccctagtggt
ttaaattatgcagatcctaaagttagaaagattctttctagacttcaagttattagatgg
tttaaagaatccaagaatcgtccagagtggatgattttaaaagtgattcctgttatacct
cctaatcttcgtcctattattcaactttctggaggtaggtttacatcttctgatattaat
actttctatagaaggattattgttagaaatgataggcttgctagaattctgaatcttaat
gttgcacatatcatttctaacaatgaaaagagaatgttgcaagaggctgttgactccttg
attgataactctagcaggaagaaacctttaactgctagagataggcatcctcttaaatct
attacggatcatctgaagggtaaacaaggtcttttccgacaaaacttgcttggtaaaagg
gtagactattccggtcgttctgttatcgttgtaggatctgagttgaagatgtatcaggta
gggttgcctatcttgatgattttatctctgtttaagccgtttattatcagggacttaatt
agaaaggttgatgacaatggtgtggagtgtgttcctattgcctccaatattaaaaccgct
tccaaaatgattatggagcagtcagatgagatttggccggttgttcacaaggttataaaa
gaaagaccggttcttttaaacagggctcctactctgcaccgtttaagtattcaagctttt
gaaccgattctggttgagggtaaggctatttgtttacatccgttggttacgactgctttt
aatgctgacttcgatggtgaccaaatggcagttcatttgcctttgtctgatgaagctgtt
catgaggctagatctatgttgttagctccttgacaaattctaggacctaaagatggtaag
cctatcgttactccttctcaggatatggtgttaggtatttatcacttgaccaccgaaaat
aaagagtctataggttctggttctttgttcgccactccagatgaggtggttcatgcttat
caacttggaaaagttgagttgtcttctattattgcgatcggcacttctggttttcctaag
aagagatttccgaagtcaggtgtcttgatcacaactgtagggaagatcatatttaatagc
agacttcctgaggactataagtttattaatcaaagtgagggaatgtgggtgtcggagaat
gacattttggactatggggtaaatagattttattacattaatgcttaccaagagaaggat
ccgtttgctaaatctgttattggtaggttgatagaggatctttatgacaattattcttgt
caagatctagctccagttctggactctattaaagatatgggatttgaatattccaccaag
tcttgtaccaccatttccgcctttgatgttccgaaattttctgataagcaatctctttta
gaggaagctgataagttagtggagcaacaaaaatcgttctttagaaagggtttagttact
gacgatgagaaatataagaatgttatttccatttgatcttccgttaaggacaaagtttct
gatcacattaagaatgctcttaaatctaaggagtttcagaacaatccgattgttattatg
gcaagatctggtgctaggggtaatgtatctaactttattcagctatctggaatgaggggt
ttgatgaacaagtcctataactatgatcagaatacaaatactaaggtggttagggatatt
atcgaagttcctattaaacactcctttattgaaggtttgacagttatagaatactttaac
tcctcctatggtgctagaaaaggtatgactgatactgccatgaaaaccgctaagtctggt
tatacaactagaaagttggtggatgccgctcaagaggttattgtgaaggttgaggattgt
ggatctaataaaggacttattgttgaggagcttagagataaagagcattcaatgcctatt
aaaactcttagagatagaatcttattcaaatgtgcgcatgttaatattcttcaccctgaa
accggagaggttattgttggagcaaatgaagtaattacgaaagaggtcgccgacaagata
gtatctgctgggattactaaggtacaggttagatctgttcttcattgtaggttgaagcaa
ggtatttgtcaaaaatgttttggttatgacttgacaacaaaacaaatgattgatgtgggc
accactattggtgttattgcggctcagtccattggtgagccggctgttcagttgaccatg
agaacgtttcactccgggggggttgctggtgaatctaatatttcccaaggttttgaaaga
ttgagacagttgtttgaaatagtggctcctaaaaaatgggagacttccgtaatttctgaa
attaccggtactgttgaaagcatagaaattagagatgacgaaagggtggttactgtttcg
agtgatattaacagaagggagtataactgtgacctgaaccttccgatattagtgaagaaa
ggtcagaagattaattttggggacagaatatgtgatgggtctgtagatcttaaaaaactg
ttagaggtttctggggtggaagcggtaaggaaatatatagttcaagagatttgaaaggtt
tattgaattcaaggtattgacgtttccgagaaatatattgagattatagtaagacagttg
acttctagacttaaagtgctttctcctaatgattccaaatgagctatgggagaaattgta
gactattcttcttttgtggatgaatgtgctaggttgcttttggatggaaaaactccacct
attgcgacaagtattatctttggtcttgaagaggttcctgagaaaacaaattctttcttg
gcggcagcttccttccaagataccaaaaagattttgacagatgcgtgtgttagaggacag
gttgattatctaaattctctgaaagagaatattatggtgggtaacttgattcctgccgga
acaggtcttaagtctcctgaggaagttgtttctgatgaaagatcttataggaatgtcttc
aattattag
DBGET
integrated database retrieval system
