Mycobacterium heckeshornense: JMUB5695_00384
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Entry
JMUB5695_00384 CDS
T07325
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhek
Mycobacterium heckeshornense
Brite
KEGG Orthology (KO) [BR:
mhek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhek03032
]
JMUB5695_00384 (topA)
03400 DNA repair and recombination proteins [BR:
mhek03400
]
JMUB5695_00384 (topA)
Enzymes [BR:
mhek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JMUB5695_00384 (topA)
DNA replication proteins [BR:
mhek03032
]
Prokaryotic type
DNA Topoisomerases
JMUB5695_00384 (topA)
DNA repair and recombination proteins [BR:
mhek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JMUB5695_00384 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BCQ06969
LinkDB
All DBs
Position
419364..422141
Genome browser
AA seq
925 aa
AA seq
DB search
MANGGRSTGRNGSARRLVIVESPTKARKLAGYLGSDYIVESSRGHIRDLPRNAADVPAKY
KSEPWARLGVDVDHNFEPLYIISPDKKSTVNELKARLKDADELYLATDGDREGEAIAWHL
LETLKPRIPVKRMVFHEITEPAIRAAAEHPRDLDNDLVDAQETRRILDRLYGYEVSPVLW
KKIAPKLSAGRVQSVATRIIVQRERERMAFRSAEYWDVVAELDASASDPKASPPTFTARL
TSVDGLRVATGRDFDALGGLRADRQVSGLIVLDEAGATAIAEGLRGARLTVASAEEKPYT
RRPYAPFMTSTLQQEAGRKLRFSAERTMSVAQRLYENGYITYMRTDSTTLSESAINAART
QARQLYGEEYVSPSPRQYTRKVKNAQEAHEAIRPAGETFATPDAVRRELDGDDFRLYELI
WQRTVASQMADARGTTLSLRITGMSGDRQVVFAASGRTITFPGFLKAYVETVDELAGGEA
DDAERRLPHLREGQRLDAAEVVPDQHSTNPPPRYTEASLVRALEELGIGRPSTYSSIIKT
IQDRGYVYKKGSALVPSWVAFAVTGLLEQHFGRLVDYEFTAAMEDGLDEIAAGHEHRTNW
LSKFYFGGDYGVPGSVARSGGLKKLVGVNLEGIDAREVNSIKLFDDAEGRPIYVRVGKNG
PYLERMVAGDDGEPTPQRANLNDTLAPDELTLEVAEELFATPQEGRVLGNDPETGYQIVA
KDGRYGPYVTEILPEEPDGDGVTAKKGRKPGGPKPRTASLLRSMDLQTVTLDDALKLLSL
PRVVGVDPETGEEITAQNGRYGPYLKRGNDSRSLASEDQIFTITLDEALKIYAEPKRRGR
QGASAPPLRELGIDPASGRQMLVKDGRFGPYVTDGETNASLRKGDDVLSITDERAAELLA
DRRARGPAKRTARKTTRKAAAKKRA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
ttggctaacggcggccgcagcaccggcagaaatggcagcgcgcggcgactcgtcatcgtg
gagtcgccgaccaaagcgcgcaaattagccggctacctgggctccgactacatcgtcgag
tcctcccggggtcacatccgcgacctgccacgaaacgccgcagacgtgcccgccaagtac
aagtctgaaccgtgggcccggctcggtgtggacgtcgaccacaacttcgaaccgctctac
atcatcagccccgacaagaaaagcaccgtcaacgagctcaaagcccggctcaaagacgcc
gacgagctgtatctggccaccgacggcgaccgcgaaggtgaggccatcgcctggcacctg
ctggaaacgctcaagccgcgcataccggtcaaacggatggtgttccacgagatcaccgaa
ccggcgatccgcgccgccgccgagcatccccgcgatttggacaacgacctggtcgacgcc
caagagacccgccgcatcctggaccggctatacggctacgaggtcagcccggtgctctgg
aagaagatcgcgcccaagctttcggcgggccgggtgcagtcggtggccacccgcatcatc
gtgcagcgcgaacgtgagcggatggcgttccgcagcgccgagtactgggacgtggtcgcc
gagctggacgccagcgcctccgatcccaaggcgagcccacccaccttcacggcccggctg
accagcgtcgacggcctgcgggtggccaccgggcgcgatttcgacgcgctgggcggcctg
cgcgcggaccggcaggtctccggcctcatcgtgctcgacgaggccggtgccaccgcgatc
gccgagggattgcgtggcgcgcgtctgaccgtggcgtccgccgaggaaaagccctacacc
cggcggccgtacgcgccgttcatgacctcgacgctgcagcaggaggccggccgtaagctg
cggttctccgcggaacggacgatgagcgtcgcgcagcggctctacgagaacggctacatc
acctacatgcgcaccgactccaccacgctgtcggagtcggcgatcaacgccgcccgcacc
caagcgcgccagctctacggcgaggagtacgtgtcgccgtcgccgcggcagtacacccgc
aaggtgaagaacgcccaggaggcgcacgaagcgatcaggccggccggtgagacgttcgcc
actcccgacgcggtgcgccgcgaactcgacggtgacgactttcgcctctacgagctgatc
tggcagcgcacggtggcctcccagatggccgacgcgcgcggcaccacgctgagcctgcgg
atcaccggtatgtccggcgaccggcaggtggtgttcgccgcgagcgggcgcaccatcacc
ttccccgggtttctcaaggcctatgtggaaaccgtcgacgagctggccggcggtgaggcc
gacgacgccgagcgacgcctgccgcacctgagggaggggcagcggctcgacgccgccgaa
gtggtcccggatcagcactccaccaacccgccgccgcgctacacggaggcctcgctggtc
cgggcgctcgaagagctgggcatcgggcggccgtcgacgtattcgtcgatcatcaagacc
atccaggaccgcggctatgtgtacaagaagggcagcgccctggtcccgtcgtgggtggcg
ttcgcggtcaccgggcttttggaacagcatttcggccggctcgtcgactacgaattcacg
gcggcgatggaagacggtctcgacgagatcgccgccggccatgagcaccgcacgaactgg
ctttccaaattctacttcggcggcgactatggtgtaccgggttcggtggcgcgttcgggc
ggcttgaagaagctggtcggcgtcaacctggaaggcatcgatgcgcgagaagtcaactcc
atcaagttgtttgacgacgccgaaggacgccccatctatgtgcgggtgggcaagaacggg
ccctatctggaacgcatggtggccggggacgacggcgagccgacgcctcagcgggccaac
cttaacgacaccctggcgcccgacgagctgacattggaggtggccgaggagcttttcgcc
accccccaggagggtcgtgtgctggggaacgatcccgagaccggctaccagatcgtggcc
aaagacggccgatacgggccctatgtcaccgagattctgcccgaggagcccgacggtgac
ggcgttaccgccaagaagggcagaaaacccggtggtcccaaaccccgtaccgcgtcgttg
ctgcgcagcatggatctgcagaccgtcaccctcgatgacgcactgaaactgctgtctctg
ccccgcgtcgtcggtgtcgaccccgagacgggtgaggagatcaccgcacagaacggccgc
tacgggccatacctcaagcggggcaacgattctcgatcgcttgcgagtgaagaccagatt
ttcacgatcacgttggacgaagctttgaaaatctacgcggagcccaaacgccgtggccgc
caaggcgcctcggcgccgccgctgcgtgaactgggaatcgacccggcctcgggcaggcag
atgctggtcaaggacggccggttcggaccctatgtcaccgacggggagaccaacgccagt
ctgcgcaagggcgacgacgtgttgtccatcaccgacgagcgcgccgccgaattgctagcc
gaccgccgggcccgcgggccggccaagcggacggccagaaagacaacccgcaaggcggcg
gcgaagaagcgggcctag
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