Mycobacterium heckeshornense: JMUB5695_01181
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Entry
JMUB5695_01181 CDS
T07325
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mhek
Mycobacterium heckeshornense
Pathway
mhek03420
Nucleotide excision repair
mhek03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JMUB5695_01181 (uvrD1)
03430 Mismatch repair
JMUB5695_01181 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhek03400
]
JMUB5695_01181 (uvrD1)
Enzymes [BR:
mhek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JMUB5695_01181 (uvrD1)
DNA repair and recombination proteins [BR:
mhek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JMUB5695_01181 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
JMUB5695_01181 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
CarD_TRCF_RID
DEAD
Motif
Other DBs
NCBI-ProteinID:
BCQ07759
LinkDB
All DBs
Position
1195799..1198225
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AA seq
808 aa
AA seq
DB search
MRAGDDADNSDEEERRISRAGDDVENSDEEEPRILSVHVTDAKPASEAEQLLDGLNPQQR
QAVLHEGSPLLIVAGAGSGKTAVLTRRIAYLMAARDVGAGQILAITFTNKAAAEMRDRVV
QLVGPRARSMWVSTFHSMCVRILRNHASLIAGLNSNFSIYDADDSRRLLQMVGRDMGLDI
KRYSPRLLANRISHLKNELIDTEKAAASVSDGADELARTVAAVYAEYQRRLRAANALDFD
DLISETVWVLQTFPQIAQHYRRRFRHILVDEYQDTNHAQYVLVRELVGRDVEDEVPPGEL
CVVGDADQSIYAFRGATIRNIEDFERDYPDATTILLEQNYRSTQNILSAANSVIARNSGR
RDKRLWTDAGAGELIVGYVADNEHDEARFVAEEIDTLVERGEITYQDVAVFYRTNNSSRS
LEEVFIRAGIPYKVVGGVRFYERKEIRDIVAYLRVLDNPGDAVSLRRILNTPRRGIGDRA
EACVAVYAENTGVSFADALVAAAEGKVPMLNSRSAKAISGFVELLDDLRGRLDDDLGELV
EVVLDRTGYRAELESSSDPQDLARLDNLNELVSVAHEFSIDRANAATFEESLHTPEDEDV
PHTGVLAEFLERVSLVAEADEIPEQNSGVVTLMTLHTAKGLEFPVVFVTGWEDGMFPHMR
ALDDPRELSEERRLAYVGITRARQRLYVSRAKVRSSWGQPVLNPESRFLREIPPELIDWR
RSEPAPSVSAPVTGAGRFGAPRPSPARSAAGRRPLLVLQPGDRVSHDKYGLGRVEEVSGA
GESAMSLIDFGSSGRVKLMHNHAPLTKL
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgccggcgacgatgcggacaatagcgatgaggaggagcgacgcatatcgcgcgcc
ggcgacgatgtggagaatagcgatgaggaggagccgcgcatattgagcgtgcatgtgacc
gatgccaagcccgcgtctgaagcagaacaactcctcgacgggctcaacccgcagcagcgc
caggccgttttgcacgaggggtcgccgctgctgatcgtcgccggcgcaggctcgggcaag
acggcggtactgacccgccgcatcgcctacctgatggccgcgcgcgacgtcggcgccggg
cagatactggcgatcactttcaccaacaaggcggccgccgagatgcgcgaccgcgtggtg
cagctcgtcggaccgcgcgcgcgatcaatgtgggtgtcgacgtttcactcgatgtgcgtg
cggatcttgcgcaatcatgcctcgctcattgcgggcttgaattccaacttttcgatctat
gacgccgacgattcccgacgcctgctgcagatggtcggcagggatatgggcctcgacatc
aagcggtactcgccgcgtctgctggccaaccgcatctcccacctgaagaacgagctgatc
gacaccgaaaaagcagcggcgagcgtgtccgacggcgccgacgagctcgcccgtacggtc
gccgctgtatacgccgaatatcagcggcggctgcgcgcggccaatgcgctggacttcgat
gatttgatttcagagaccgtttgggtattgcagacgtttccgcagatcgcccagcattac
cggcgccggttccggcacattctggtcgacgagtaccaggacaccaaccacgcccagtat
gtcctggtgcgggaattggtcggtcgtgatgtggaagacgaagtcccgcccggtgagtta
tgtgtggtcggtgacgccgaccagtcgatctacgcgttccgcggtgccaccatccgcaac
atcgaagacttcgaacgcgactacccggacgccacaacgattctgctggaacagaattac
cgctccacccaaaacattctgtctgcggccaactcggtcatcgcacgcaactccgggcgg
cgcgacaaacgcctgtggaccgatgccggagccggcgaactgatcgtcggctacgtcgcc
gacaacgagcacgatgaggcgaggtttgtcgccgaggagatcgacacgctcgtcgagcgt
ggcgagatcacctatcaggatgtggccgtcttctaccgcacgaacaactcatcgcggtct
ttggaagaagtgttcatccgcgctggcatcccctacaaggtcgttgggggagtgcggttt
tacgagcgcaaagagatccgcgacatcgtcgcttacctgcgggtgctggataacccggga
gacgcggtcagtcttcggcgcatcctcaacaccccgcggcgcggcatcggtgatcgggcc
gaggcctgtgtagcggtgtacgccgagaacaccggcgtcagcttcgccgacgcgctggtc
gccgcggccgagggcaaggttccgatgttgaactcccgctcggccaaagcgatctcgggg
ttcgtcgagctgctcgacgatctgcggggtcgtctcgatgacgacctcggtgagctggtg
gaggtcgtgctagataggacggggtatcgcgccgaactcgagtcctccagtgatccacag
gatttagcaagacttgacaacctcaacgaacttgtaagtgtcgcacacgaattcagcatt
gaccgggccaacgccgccacgttcgaagagtctttacacactcccgaagacgaagacgtg
ccccacaccggtgtgctggcggagttccttgagcgggtgtcgctggtagccgaggccgac
gagatccccgagcagaattcaggtgttgtcaccctgatgaccctgcacaccgcgaagggc
ttggagttcccggtggtgttcgtgacgggttgggaggacgggatgttcccgcacatgcgc
gcgctggacgatccgcgcgagctctccgaggaacgccggctggcttacgtcggcatcacc
cgggcccgccaacgactctatgtgagccgcgccaaggtccgctcgtcgtggggccagccg
gtgctgaatccggaatcgcggtttttgcgggaaatcccgccagaactcatcgactggcgg
cgcagcgagccggcgccgtcggtcagcgccccggtgaccggcgccggtcgattcggcgcc
ccccgcccgtcgccggctcgctcggcggccggcaggcgcccactgttggtgcttcaaccg
ggcgacagggtttcgcacgacaagtacgggctgggccgggtggaggaagtctccggggcc
ggcgaatcggcgatgtcactgatcgatttcggcagttccggccgggtcaagctgatgcac
aaccacgccccgctgaccaagctgtag
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