Mycobacterium heckeshornense: JMUB5695_01624
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Entry
JMUB5695_01624 CDS
T07325
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mhek
Mycobacterium heckeshornense
Pathway
mhek03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhek00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JMUB5695_01624 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhek03019
]
JMUB5695_01624 (deaD)
03009 Ribosome biogenesis [BR:
mhek03009
]
JMUB5695_01624 (deaD)
Enzymes [BR:
mhek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JMUB5695_01624 (deaD)
Messenger RNA biogenesis [BR:
mhek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JMUB5695_01624 (deaD)
Ribosome biogenesis [BR:
mhek03009
]
Prokaryotic type
rRNA helicases
JMUB5695_01624 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
HEM4
LytR_C
CMS1
Ribosomal_S11
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
BCQ08199
LinkDB
All DBs
Position
1653381..1655093
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AA seq
570 aa
AA seq
DB search
MTSPDAAAETIPATFDDLQIHPSVRRAIADVGYESPSAIQAATIPALMAGSDVVGLAQTG
TGKTAAFAIPILSRIDTTSTATQALVLAPTRELALQVSEAFSRYGAHLPRLTVLPIYGGA
SYGVQLAGLKRGAQVVVGTPGRVIDHLERGTLDLSRMDYLVLDEADEMLAMGFAEDVERI
LSDTPEYKQVALFSATMPPAIRALTARYLHEPLEVTVEAKTTTAENISQRYVQVAGPRKM
DALTRVLEVEPFEAMIVFVRTKQATEEVAEKLRARGFSAAAINGDIPQAQRERTITALKD
GGVDILVATDVAARGLDVERVSHVLNYDIPHDTESYVHRIGRTGRAGRSGTALLFVSPRE
RHLLKAIEKATRQKLVEAELPTVDDVNAQRVAKFADSITDALGSPGVELFRSLVEDYERE
HNVPMADIAAALALQSRNGEEFFMAPEPPEPPRPRRTGVRTEGRTAKPVRKPGAGMATYR
IGVGKRHRVGPGAIVGAIANEGGLHRSDFGHITIGSDFSLVELPARLPRATLKALEHTRI
SGIPINLRPDRATRNGPRRGRAQPRRKPAR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgacctccccggacgcggcggccgagaccatccctgccaccttcgacgacctgcagatc
catccatcggttcggcgggcgatagccgacgtgggctacgaatccccgtcggccatccag
gcggcgacgattccggcgctgatggccggctccgacgtggtcgggctggcccagaccggc
acgggtaagacggcggccttcgcgatcccgatcctgtcccggatcgacaccaccagcacc
gcgacccaagcgctggtgctggcgccgacccgcgaactggcgctgcaggtgtccgaggcg
tttagccgctacggcgcgcacctgccgcggctgacggtgctgccgatctacggcggcgcg
tcctacggcgtgcagctggccgggctcaagcgcggcgcccaggtggtcgtcggcactccc
ggccgggtcatcgaccacctcgaacggggaaccctcgacctgtcccggatggattatctg
gtgctcgacgaagccgacgagatgctcgcaatgggtttcgccgaggacgttgaacgcatt
ctgtccgacaccccggagtacaagcaggtggccctgttttccgcgacgatgccgccggct
atccgcgcacttaccgcgagatatctgcatgagccgctcgaagtcaccgtcgaagccaaa
accacgacagcggagaacatttcacagcgctacgtccaagtggccggtccccgcaagatg
gacgcgctaacccgggtgcttgaagtcgagccgttcgaggcgatgatcgtcttcgtccgc
accaaacaggccaccgaggaggtcgccgaaaagctgcgtgcccgagggttttccgccgcc
gcgatcaacggcgacattccgcaggcgcagcgggagcgcaccatcacggcgctcaaagac
ggcggcgtcgacattctggtcgccaccgacgtggcggcccgcgggctggacgtagagcga
gtgtcgcatgtgctgaactacgacatcccgcatgacaccgagtcctacgtgcaccggatc
ggccgcaccggcagggcgggacgttcgggaaccgcgctgctgttcgtctcaccgcgagag
cgccacctgctcaaggctatcgaaaaggcaacgcgtcaaaagcttgtcgaagccgaactg
cccaccgtcgacgacgtcaacgcccagcgggtggccaagttcgccgattccatcaccgac
gccctgggctcgccgggcgtggagctgttccgcagcctggtcgaagactacgaacgcgaa
cacaacgttcccatggccgacatcgcggcggcgctggcgctgcagtcgcgcaacggcgaa
gaattcttcatggcgccggagccgcccgagccgccgcgtccccgccgcaccggggtccgc
accgagggccgcaccgccaagccggtgcgcaaacccggagcgggcatggcgacctaccgc
atcggcgtcggcaaacggcatcgggtcggtccgggcgcgatcgtcggcgcaatcgccaac
gaagggggtttgcaccgcagcgatttcggccacatcacgatcggcagtgacttctccctg
gtcgagttgcccgcccggctgccccgcgcaacgttgaaggcgctcgaacacacccgcatc
tccggtatcccgatcaacctgcggcccgaccgggcaacccgcaacggcccccgccgcggc
cgcgctcaaccacgccgaaaaccagccagatga
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