Mycobacterium heckeshornense: JMUB5695_01843
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Entry
JMUB5695_01843 CDS
T07325
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mhek
Mycobacterium heckeshornense
Pathway
mhek03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mhek00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
JMUB5695_01843 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhek03019
]
JMUB5695_01843 (orn)
03009 Ribosome biogenesis [BR:
mhek03009
]
JMUB5695_01843 (orn)
Messenger RNA biogenesis [BR:
mhek03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JMUB5695_01843 (orn)
Ribosome biogenesis [BR:
mhek03009
]
Eukaryotic type
Pre-60S particles
RNases
JMUB5695_01843 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DUF5401
Motif
Other DBs
NCBI-ProteinID:
BCQ08411
LinkDB
All DBs
Position
complement(1876477..1877124)
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AA seq
215 aa
AA seq
DB search
MHDELVWIDCEMTGLNLRSDRLIEIAALVTDGELNILGDGVDVVIHVEDAALASMIDVVA
DMHTRSGLIDEVKSSTVDLATAETMVLAYIREHVKQPKTAPLAGNSIATDRAFIARDMPA
LDSFLHYRMIDVSTIKELCRRWYPRIYYGQPTKGLAHRALADIHESIRELKFYRRTAFVP
PPGPSTSDIAAVAAELGAVTDAPEETDSATGRPSG
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgacgaactggtgtggatcgactgcgagatgaccgggctgaacctgcgctcagac
cggttgatcgagatcgcggccctggtcaccgatggtgagctgaacatccttggcgatggg
gtcgacgtggtgatccacgtcgaggacgctgcgctggcgtcgatgatcgacgtcgtcgcc
gacatgcacacccgctcgggcctgatcgacgaggtgaagtcctccaccgtcgacctggcc
acggccgagacgatggtgctcgcttatatccgcgagcacgtcaagcaacccaagaccgcc
ccgctggccggcaattcgatcgccaccgaccgcgccttcatcgcccgcgatatgcccgca
ctggactcgtttctgcactaccggatgatcgacgtgagcacgatcaaggaactctgccgg
cgctggtatccgcgtatctactacgggcagccgacgaagggactcgcgcatcgggcgctc
gccgacatccacgagtccatccgcgaactgaagttctaccggcgcaccgcgttcgtgcca
ccgccggggccgtctaccagcgacatcgccgccgtggccgccgagctgggggcggtgacg
gacgcacccgaggaaaccgattcggccaccgggcgcccgagcggttaa
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