Mycobacterium heckeshornense: JMUB5695_02748
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Entry
JMUB5695_02748 CDS
T07325
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mhek
Mycobacterium heckeshornense
Pathway
mhek03030
DNA replication
mhek03430
Mismatch repair
mhek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mhek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JMUB5695_02748 (dnaE)
03430 Mismatch repair
JMUB5695_02748 (dnaE)
03440 Homologous recombination
JMUB5695_02748 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhek03032
]
JMUB5695_02748 (dnaE)
03400 DNA repair and recombination proteins [BR:
mhek03400
]
JMUB5695_02748 (dnaE)
Enzymes [BR:
mhek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JMUB5695_02748 (dnaE)
DNA replication proteins [BR:
mhek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JMUB5695_02748 (dnaE)
DNA repair and recombination proteins [BR:
mhek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JMUB5695_02748 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
BCQ09304
LinkDB
All DBs
Position
complement(2863300..2866857)
Genome browser
AA seq
1185 aa
AA seq
DB search
MGGHRLASAMTGSFVHLHNHTEYSMLDGAAKISPMLAEAQRLGMSAIGMTDHGNMFGASE
FYNACTGAGIKPIIGVEAYVAPGSRFDSRRVFWGDPAQKGDDVSGSGSYTHLTMIAENAA
GLRNLFKLTSLASFEGQLGKWSRMDAELIAEYAGGIIATTGCPSGEVQTRLRLGQHREAL
QSAARWREIFGPDNYFLELMDHGLAIERRVRDGLLEIGRKLGIKPLATNDCHYVTRDAAH
NHEALLCVQTGKTLSDPTRFKFEGDGYYLKSAAEMRAIWDDAVPGACDTTLLIAERVGSY
AEVWTPRNRMPVFPVPEGHDQASWLRHEVEAGLARRFPDGIPPGYAERAAYEIEVICAKG
FPSYFLIVADLVNYARSVNIRVGPGRGSAAGSLVAYALGITDIDPIPHGLLFERFLNPER
TSMPDIDIDFDDRRRGEMVRYAADKWGHDRVAQVITFGTIKTKAALKDSARIHYGQPGFA
IADRITKALPPPIMAKDIPLSGITDPSHERYKEAAEVRGLIDTDPDVRTIYETARGLEGL
IRNAGVHACAVIMSSEPLTDAIPLWKRPQDGAIITGWDYPACEEIGLLKMDFLGLRNLTI
IGDAIENIKANRGIDVDLESVPLDDPTTYALLGRGDTLGVFQLDGGPMRDLLRRMQPTGF
EDVVAVIALYRPGPMGMNAHNDYADRKNGRQPITPIHPELAEPLQEILAETYGLIVYQEQ
IMRIAQKVAGYSLAQADILRKAMGKKKADVLAAEYESFAAGMRANGFSAGAIKALWDTIL
PFADYAFNKSHAAGYAMVSYWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRKLGI
TVLPPDVNESGLNFASVGTDIRYGLGAVRNVGANVVASLLKTRTEKGKFTDFSDYLNKID
IAPCNKKVTESLIKAGAFDSLGHPRKGLFLVHTDAVDAVLGTKKAEAMGQFDLFGGTDMA
TDAVFNVKVPDEEWDDKHKLALEREMLGLYVSGHPLNGVAHLLATQVDTAIPAILDGDIP
NDAPVRVGGILASVNRRVNKNGMPWASAQLEDLTGGIEVMFFPHTYSSYGADIVDDAVVV
INARVKIQDDRICLIANDLFVPDFSNVQPVRPLEVSLPTRQCTPDKVNALKQVLARHPGT
SQVHLRLLSGDRVTTLELDPSLRVTPSPALMGDLKALLGPGCLGA
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgggcggccatagactggcgtctgcgatgactggctccttcgtgcacctgcataaccac
accgagtactcgatgctggacggtgctgcgaagatcagcccgatgctggccgaggcgcag
cgtctgggcatgtcggcaatcggtatgaccgatcacggaaacatgttcggcgccagcgag
ttctacaacgcatgcaccggagccgggatcaagccgatcatcggtgtcgaggcctatgtc
gcgcccggctcacggttcgactcgcggcgggtgttctggggcgatccggcgcagaagggc
gacgacgtctcgggcagcgggtcctacacccacctgaccatgatcgccgagaatgccgcc
gggctgcgcaacctgttcaagctgacgtcgctggcgtcgttcgagggccagttgggcaaa
tggtcgcgaatggacgccgagctgatcgccgagtacgccggcggcatcatcgccaccacc
ggctgtccctccggggaggtgcagacccggctgcggctcggccagcaccgcgaagcgctg
cagtcggccgcccggtggcgcgagatcttcggtccggacaattatttcctggagctgatg
gaccacgggttggccatcgagcggcgggtccgcgacgggctgctcgagatcggtcgcaag
ctcggcatcaagccgctggccaccaacgactgccactacgtcacccgcgacgccgcgcac
aaccacgaggcgctgctgtgcgtgcagaccggcaagaccctgtcggaccccactcggttc
aagttcgaaggcgacggctactacctgaagtcggccgccgagatgcgggcgatctgggac
gacgccgtccccggggcctgcgacaccacgctgctgatcgccgagcgggtgggctcctat
gccgaggtgtggacaccgcgcaaccggatgccggttttcccggtgcccgaagggcacgac
caggcgtcgtggctgcgccatgaggtcgaggccgggctggcccgacggttcccggacggc
ataccgccggggtatgccgagcgggccgcctacgagatcgaagtcatctgcgccaagggc
tttccgtcgtacttcctgatcgtggccgacctggtcaactacgcccgctcggtgaacatc
cgggtcggtccgggccgcggttcagcggccgggtcgctggtcgcctacgcgctgggcatc
accgacatcgacccgatcccgcacgggctgctgttcgagcggttcctcaatccggaacgc
acctcgatgcccgacatcgacatcgacttcgacgatcgtcgccgcggcgagatggtgcgc
tacgccgccgacaagtggggccacgaccgggtcgcccaggtgatcaccttcggtaccatc
aaaaccaaagcagcgctgaaggactcggcgcgtatccactacggccagcccggtttcgcg
atcgccgaccggatcaccaaggcgctgccgccgccgatcatggccaaagacatcccgctg
tcggggatcaccgatcccagccacgagcggtacaaggaagccgccgaggtgcgcgggctg
atcgacaccgatcctgacgtgcgcaccatctacgagaccgcccgcgggctggaaggtctg
atccgcaacgccggagtacacgcttgcgcagtgatcatgagcagcgaaccgctcaccgac
gcgatcccgctgtggaagcgcccgcaggacggcgcgatcatcaccggctgggattacccg
gcgtgcgaggaaatcgggctgctgaaaatggatttcctcggcctgcgaaacctgaccatc
atcggcgacgcgatcgaaaacatcaaggccaacaggggaatcgacgtcgatctcgaatcc
gtgccgctcgacgacccgaccacgtacgcgctgctgggccgaggcgacacgctcggtgtc
ttccaactcgacggcggccccatgcgggatctgctgcggcgcatgcagcccaccggcttc
gaagacgtcgtcgcggtgatcgcgctgtaccggcccgggccgatgggcatgaacgcccac
aacgactacgccgaccgcaagaacggccgccagcccatcacaccgatccaccccgaactc
gccgaaccgttgcaggaaatcctggccgagacgtacggcttgatcgtctaccaggagcag
atcatgcggatcgcgcagaaggtggcgggttattcgctggcccaagccgacattctgcga
aaagccatgggcaagaagaaagccgacgtactggccgcggaatacgaaagcttcgcggca
ggcatgcgtgccaacggcttttcggcaggtgcgatcaaggcgctgtgggacaccatcttg
ccgttcgccgactacgcgttcaacaagtcgcacgccgccgggtatgcgatggtgtcctat
tggaccgcctacctgaaagccaactacccggccgaatatatggcggggcttttgacctcg
gttggcgacgacaaggacaaagccgctgtctacttggctgattgccgcaagctgggcatc
acggtgctgccgcccgacgtcaacgagtcgggtttgaacttcgcgtcggtaggcaccgac
atccgctacggactcggcgccgtgcgcaatgtcggtgcgaacgttgttgcctcgctgctc
aagacccgcaccgagaagggtaagttcaccgacttctccgactacctgaacaagatcgac
atcgcgccgtgcaacaagaaggtcaccgaatcgctgatcaaagcgggcgccttcgattcg
ctgggccacccgcgcaagggcttgttcctggttcacacggatgccgtggacgcggtgctg
ggcaccaagaaggccgaggcgatgggccagttcgacttgttcggcggcaccgacatggcc
accgatgcggtgttcaacgtcaaagtgcccgacgaggagtgggacgacaagcacaagctg
gcgttggagcgcgaaatgctggggctgtacgtgtccgggcatccgctcaacggagtggcg
catctgctggccacccaggtagacaccgccatcccggcgatcctcgacggcgacatcccc
aatgacgctccggtgcgggttggcggcatcctggcatcggtgaaccgccgggtgaacaag
aacggaatgccctgggcatcagcgcagttagaagaccttaccggtggcatcgaggtgatg
ttcttcccgcacacctactccagttacggtgccgacatcgtcgacgacgccgtggtggtg
atcaacgcgcgcgtgaagattcaggacgatcggatctgcttgatcgccaatgaccttttt
gtgccagacttttcgaacgtgcagccagtgcggccactggaagtgagcttgcccacccgc
caatgcacacccgacaaggtcaacgcgctcaaacaggtcctggcccgccatcccggcact
tcccaggtccatctgcggctgctcagcggagaccgggtcaccactttggagttggacccg
tcgctgcgggtgacaccgtccccggcgctgatgggtgacctcaaggcgctgctgggcccg
ggatgtttgggcgcctaa
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